Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2138 ATGGAAGGTGATCAGTGTGTTGAGAGTTCTGGTGGCGTGGGTTCTGAACCGGGTTTGGGGAAAGAGGAGAAGAATTCGAGAGTGGAGATTGATACCTCGGCTCCGTTTGAGTCCGTGAAGGAGGCTGTGACCCGATTCGGTGGTGTTGGGTTTTGGAAACCCACCCGTAATAATCTCTCGGATCTTGAGCAGGACACACAAGATATTGACACTGGAAAACTAGAGGAGCAAGCAGCAGCATTAGAGAAAGAACTGATCCTGAAAGAACTGGAAACTCTGGATGTGTTAAAAGATTTGGAAAGTACAAAAAAACTTGTAGAAGATTTGAAATTGAAGCTACAAAAGGAAGAAAGTGAAGCTAATTTGAAGAACAACAACAAAGAAGAAGATAAGGAGAATCAAGTGAATCAATTAGAACTTCCTCCGAATTCAAAGCAAGGTTTTAGCTTGTGTCCTTCATCTAAACCAGGTCTAATACTAATGGAATTGAAGCAGGCTAAACTGAACTTAACACGAACCACGAATGATCTTGCCGGTGTACGAGCTTCTATAGTATCACTTAAGAAGAAGCTAGAGAAGGAAAGAGTCGCACTCTTGAAAACTCGCGAGAGATTAACCCGGAATTCATCGAAACTATCTTCACTTGAGGAAGAGCTGAACCACACAAGACTAAAACTTCAAGTGGCAAAAGATGATAATGCCTCAGATCTCACAAAAGAGCTTCAGAGGTTGAGTTCTGAAGCGGATCATTTCAAAAGAATGGGAGAGGCTGCGAAATCAGAAGTCTTGAGAACAATGTCTGAGATTGAACAGACAAAAACTATGATAAGAACAGCCGAATTAAGGCTGGTTGCTGCTAGAAAGATGAAGGAAGCTGCTAGAGCTGCAGAATCAGCTTCATTAGCAGAAATCAATGCACTATCTAATAACAATTCATCTGAAGTAGTAACTCTTTCACTTGAGGAGTATTCTGCTCTAACATGTAAAGCCAGAGAGGCAGAGGAGGACTCTAAGAAAAGAGTTATGGAAGCGATGCTTCGAGTCGATGAAGCAAATTTATCAAAGATGGAGATGCTGAAGATGGTAGAGGAGGCTGCAGAAGAAGTTAAGACCAGCAAGAAGGCTCTGGAAGAAGCTATGGAAAGAGTAGAGGCTGCAAATAGAGGGAAGCAAGCAATTGAAGAAGCATTAAGGAAGGGTCACAAAAGAAGGCCTTCTTTTGTATATAACTCtgccaaattaaaaaattcttaCCTTTCTCATCATAGGAGAAATTCTCAGTCATTTGATGTAGATGATGAAGGCAAACCAGAAATCTCAAAGCCAACTCTATCCATAGGACAAATTCTGAGCAGGAAGCTGCTTCTTTCACATGAGTTTGAAGTAGGATCATTAGGCCAGATGCTTGGAAAACAAAAGGATGATTCATGCTTCAGCAAGCAGTTTCCTgcaaagagaaagaaatttGGGTTTTCTAGATTGTCACATCTTTTGGGAaaacaacaaaagaagaagCCAACTTTGAATTTGAGAGCATACATTGCGCTGCTGATCTTGGTCACTTGCTCCCTTAATAAGAATGTCTTCACAAGGATAGAGAATCCCACAAATGGCATCCTTATGAGTGCTCTGTATTCCATGGACAACGGGAAATGA 1656 0.4022 MEGDQCVESSGGVGSEPGLGKEEKNSRVEIDTSAPFESVKEAVTRFGGVGFWKPTRNNLSDLEQDTQDIDTGKLEEQAAALEKELILKELETLDVLKDLESTKKLVEDLKLKLQKEESEANLKNNNKEEDKENQVNQLELPPNSKQGFSLCPSSKPGLILMELKQAKLNLTRTTNDLAGVRASIVSLKKKLEKERVALLKTRERLTRNSSKLSSLEEELNHTRLKLQVAKDDNASDLTKELQRLSSEADHFKRMGEAAKSEVLRTMSEIEQTKTMIRTAELRLVAARKMKEAARAAESASLAEINALSNNNSSEVVTLSLEEYSALTCKAREAEEDSKKRVMEAMLRVDEANLSKMEMLKMVEEAAEEVKTSKKALEEAMERVEAANRGKQAIEEALRKGHKRRPSFVYNSAKLKNSYLSHHRRNSQSFDVDDEGKPEISKPTLSIGQILSRKLLLSHEFEVGSLGQMLGKQKDDSCFSKQFPAKRKKFGFSRLSHLLGKQQKKKPTLNLRAYIALLILVTCSLNKNVFTRIENPTNGILMSALYSMDNGK 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2138 551 PANTHER MYOSIN HEAVY CHAIN-LIKE 23 507 - -
Sto1g2138 551 Coils Coil 234 254 - -
Sto1g2138 551 MobiDBLite consensus disorder prediction 118 135 - -
Sto1g2138 551 Gene3D - 159 329 - -
Sto1g2138 551 Coils Coil 96 133 - -
Sto1g2138 551 Coils Coil 71 91 - -
Sto1g2138 551 Coils Coil 212 232 - -
Sto1g2138 551 Pfam Weak chloroplast movement under blue light 161 399 IPR008545 -
Sto1g2138 551 Pfam Weak chloroplast movement under blue light 28 124 IPR008545 -
Sto1g2138 551 Coils Coil 188 208 - -
Sto1g2138 551 MobiDBLite consensus disorder prediction 118 149 - -
Sto1g2138 551 MobiDBLite consensus disorder prediction 1 32 - -
Sto1g2138 551 Coils Coil 359 396 - -
Sto1g2138 551 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 23 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2138 Sto-Chr1 29612953 29617287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2138 - - gmx:100783770 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2138 1 29612953 29617287 Sto6g0117 6 1498728 1500819 CCT
Sto1g2138 1 29612953 29617287 Sto1g2138 1 29612953 29617287 ECH