Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2132 ATGCACAATAGTGCAAGGCGAGATCTTAGCATATATGTGGCATTCCGTAATTTTGAACGTTTAGAGTTATTTGAATATCCTGAACTTAAAGAAATATGGTATGGTCAAGTAAGAGAAACACAAGAAGATGATAATATTGaaatgcaacatggcaagGTATCTTCAAATTTGGAAGAGTTGTCTTTAAATGGAAACGATGCTATGAGAATATTGAATGGTCATtgtgataaaatattttttactggCATAGAAATACTTCGCCTGCAATATTTTCAAGAGACTCCAATCATGTTTCTAAATGATATCCTTGAAAGATTTCCTAGCACAACAATGCTTCAAGTGCGTTATAGTTCTTTTGACACATTGTTCCCTTCAGATGAAATTGGTGAATGTAATAATAAAAGCCCCGCCCAAATAAAAAATCTATGGCTCTATCAATTGAAGCAGCTTACGAATATATGGAATGATGAGTCTTTGTCAGATTCCATTGCTGAAATCCTTGAATATCTCTCTGTGTGGGATTGTTCTAGTTTAATGAGATTGGCACCTCCTTCAATATCTTTCAAGAATTTAACTGCTTTGACAGTGAAGGACTGCAAAGGGTTGGTTTACTTAATGACATCCTATACTGCCAAAAGTCTTGTGCTCCTGAAATACTTGACAATTGAGAATTGCGAGATGATAGAGGATGTTCAAGATATGGACGGCCAGCCTTACAGAAATAGCTTAGGAGTGCATTACAGAATACTAGATCAGCATCTATTTTTTGCTCCGATCAGTGAGGCGTTGAACAACACTAACCATGCAATCAAATGCCGCCACATCATGAAAGTAATGAGggtttctgTGTTTAACGAGGGAAAGAAAACAAGAATAATGGAGTTCGTGGGAACAATTTGGGAGGCAACAACTTGTATTTGGAGGTGTGCTAGCAAACATGGTGCTTATATCTGTGATTTGAAGGAGAACTTAGATGAATTAGCAACTCAATGGAATGAAGTTGGAAGGACTTATAACGATGTGAAGAGAAGGGTTGAACAAGCTGAGATTACAGGACACATGGAAAGGACAGAACAAGTAGATGGTTGGCTAAAAAGTGTAGACAGAATTGAAGAGATAGTAAGGGTTATATTGCAAGAAGATGGTCCACAGACCCCAAACAATTGTTGCTGTGTGGCAAGCTACAAATTTGGAAAGAAAGTCACCAAGACAATCAATGATATTGAAAAACTAAAGGCCACAGGACAAAATTTCTCTAATGATGTTATAGTTTACCAGATACCTCGTGGAAAGGTGGATGAAATGCCCATTGGTAAGACTGTGGGTATGGATTTAATGATTGATAAAGTTTGGGACAgcattcaaaaagaaaatgttgGCATCATCGGTTTGTATGGGATGGGTGGTGTTGGGAAGACCACACTTTTAAAGAGAATCAACAATGAGTTTGCAAAGAGGTTTCATGGTTTTGATGTTGTTATCTGGGTGGTGGTATCTAAAGATCATAGCACCGGAAAAATTATGGATGTGATACGAAAAAAGTTACACATTGCGGAGAATTTGTGGATCAACAGAAGTGAAGATGAGAGAGTGGCAGAAATCTATAGGGtcatgaaacataaaaaatttgttCTGATGTTAGATGACATATGGGAGCAAATAGATCTGCAAAATTTGGGGGTTCCACTCTTAGAAGATAATAATAGATCCAAAGTTTTATTCACCACAAGGTTTGAGAATGTGTGTGATCAAATGCAAGCTcagaaaattttcaaagttgAATGCCTAACAGAGAAAGAAGCATTGGATTTGTTCTGCATGAAAGTAGGTGAAGAGTCACTAAATTCACATCCAAAAATCCCAAAGCTAGCACAACAAATTGTTACAGAATGCCAAGGATTACCTCTTGCATTGATTACGCTAGGGGCGGCGATGGCCGGTAGGAAGAGTTTAGAAGCATGGAATCATGCAATAAAGGAAATAACGAGTTCTCCTTCAGAAGTTCCAGGTATGCAGGACaaagtcttctatattctcaaGTTTAGCTTTGATAGATTGCCTACTGCCACTCACAAAAAGTGTTTCTTGTATTGTGCATTGTTTCCTGAGGATTATAAGATTGTTGTCAATGATCTTATTGATCTAATGGTTGGAGAGGGATTTCTAAATGATTCTGGTAGCATATATGATGCCTACAATCATGGCAAATTTGTACTGGAAAGCTTGAAGTTGGCATGTTTGTTGGAGAGCGATGATGATATAATTCAGGGTTCCATTGTTAAGATGCATGATGTGATTCGAGACATGGCGTTATGGTTAGCCCGTGATGAAGATCAAAAGAAATTCAAGGTTCTAGTAGAAGGTGAAGCAGTTGTAGCACCAGTAATGTCAGAACCTAATGTTGATTTATATAAGGTTGTTGATAGGATTTCTATCATAGAAGCAGAAGCAAATTGGCATATACCACCATGTCCAAACTTGTCGACCCTAATTGTTCGACGAAAAACTTGCATAtccaatttttcaaattttcaatgcATGAACAGATTGAAAGTTTTGGATCTATCAAGGAATCGTCGAATGCTTGAGATCCCTTCAGAAATAGGCCATCTGATTCACTTGGAGTTTCTTAACCTTTCAAGAACGTTCATACAAAAAAGATTTCCaattgaaatgaaaaatttGAAGAACTTGAAGGTGTTACTAATGGAGTTTGTCCACTTTAGTCTCGAAATCCTTCCTTTGGAAGTAATATCGAGTCTCGAACGATTGAGAGTGTTCAGATTTTTCAGTCATGATTTGTTTGCTGATTCTGGTAGTGACCAGAAACCAATTCTTGAAAAGCTAGAATCTCTACCACTCTTGGAGGAATTATCAATAGAAGTTCAAACTGCCACTGGAATGGAGAAATTGCTTGGATCAACCAAATTACTTTCTTGTGTAAGAAAAATGATACTGAATCAAATTGCAACCTCAATCAACATGTCCTCACTGTTAGCATCTATGTCTAAGGTGAAGCATTTGAAGCAGTTTGTATTAAATGGAATATCTCAAACCATAATGGAAGATTCAGCCATTGATTACACATGGCATTTTGGAAATCTTAGCTCAGTGGATATTTCATACTGTCATTCTTTAATTCATTTGACATGGGTCAAGTATGCTCCACTCCTTAAATATCTTTCAGTAGGAGACTATAAATCAATGGAAGTAGTaatagaggaagatgaagatgaagatgaagaagacaaagaaaagatGGATAGTATATTATTCTCAAGTCttgtttgtctcaatttgtGGGAACTTCCAAATTTGAAGATCATCCATAGGAGAGCCTTGCCATTTGCTTGCttgaaatatatgtatataagtaAGTGTCCAAATATGAAGAAGCTTCCTTTGGATTCTAACTCTGCATGCAAAAGCTTAAGAGATATTGGAGTGGAAAAACAATGGTGGAACAATCTAGAGTGGGAGGATGAAGCCACTAAGGATTTACTTCAATCAAAACTTACAAATATATGA 3528 0.3492 MHNSARRDLSIYVAFRNFERLELFEYPELKEIWYGQVRETQEDDNIEMQHGKVSSNLEELSLNGNDAMRILNGHCDKIFFTGIEILRLQYFQETPIMFLNDILERFPSTTMLQVRYSSFDTLFPSDEIGECNNKSPAQIKNLWLYQLKQLTNIWNDESLSDSIAEILEYLSVWDCSSLMRLAPPSISFKNLTALTVKDCKGLVYLMTSYTAKSLVLLKYLTIENCEMIEDVQDMDGQPYRNSLGVHYRILDQHLFFAPISEALNNTNHAIKCRHIMKVMRVSVFNEGKKTRIMEFVGTIWEATTCIWRCASKHGAYICDLKENLDELATQWNEVGRTYNDVKRRVEQAEITGHMERTEQVDGWLKSVDRIEEIVRVILQEDGPQTPNNCCCVASYKFGKKVTKTINDIEKLKATGQNFSNDVIVYQIPRGKVDEMPIGKTVGMDLMIDKVWDSIQKENVGIIGLYGMGGVGKTTLLKRINNEFAKRFHGFDVVIWVVVSKDHSTGKIMDVIRKKLHIAENLWINRSEDERVAEIYRVMKHKKFVLMLDDIWEQIDLQNLGVPLLEDNNRSKVLFTTRFENVCDQMQAQKIFKVECLTEKEALDLFCMKVGEESLNSHPKIPKLAQQIVTECQGLPLALITLGAAMAGRKSLEAWNHAIKEITSSPSEVPGMQDKVFYILKFSFDRLPTATHKKCFLYCALFPEDYKIVVNDLIDLMVGEGFLNDSGSIYDAYNHGKFVLESLKLACLLESDDDIIQGSIVKMHDVIRDMALWLARDEDQKKFKVLVEGEAVVAPVMSEPNVDLYKVVDRISIIEAEANWHIPPCPNLSTLIVRRKTCISNFSNFQCMNRLKVLDLSRNRRMLEIPSEIGHLIHLEFLNLSRTFIQKRFPIEMKNLKNLKVLLMEFVHFSLEILPLEVISSLERLRVFRFFSHDLFADSGSDQKPILEKLESLPLLEELSIEVQTATGMEKLLGSTKLLSCVRKMILNQIATSINMSSLLASMSKVKHLKQFVLNGISQTIMEDSAIDYTWHFGNLSSVDISYCHSLIHLTWVKYAPLLKYLSVGDYKSMEVVIEEDEDEDEEDKEKMDSILFSSLVCLNLWELPNLKIIHRRALPFACLKYMYISKCPNMKKLPLDSNSACKSLRDIGVEKQWWNNLEWEDEATKDLLQSKLTNI 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2132 1175 Pfam NB-ARC domain 446 684 IPR002182 GO:0043531
Sto1g2132 1175 PRINTS Disease resistance protein signature 461 476 - -
Sto1g2132 1175 PRINTS Disease resistance protein signature 537 551 - -
Sto1g2132 1175 PRINTS Disease resistance protein signature 631 645 - -
Sto1g2132 1175 PRINTS Disease resistance protein signature 845 861 - -
Sto1g2132 1175 PANTHER DISEASE RESISTANCE PROTEIN RP 304 1016 IPR044974 GO:0006952
Sto1g2132 1175 PANTHER DISEASE RESISTANCE PROTEIN RP 972 1164 IPR044974 GO:0006952
Sto1g2132 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 698 IPR027417 -
Sto1g2132 1175 PANTHER OS12G0491200 PROTEIN 972 1164 - -
Sto1g2132 1175 PANTHER OS12G0491200 PROTEIN 304 1016 - -
Sto1g2132 1175 CDD AAA 441 576 - -
Sto1g2132 1175 SUPERFAMILY L domain-like 761 1147 - -
Sto1g2132 1175 Gene3D Ribonuclease Inhibitor 807 1174 IPR032675 -
Sto1g2132 1175 Gene3D - 424 594 IPR027417 -
Sto1g2132 1175 Gene3D - 595 682 IPR042197 -
Sto1g2132 1175 Gene3D - 683 771 IPR036388 -
Sto1g2132 1175 SUPERFAMILY RNI-like 54 231 - -
Sto1g2132 1175 Gene3D Ribonuclease Inhibitor 15 237 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2132 Sto-Chr1 29528521 29546950 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2132 439 780 WRKY Transcription Factor Family AT5G45050 20.760 1.13e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2132 - K13459 mtr:MTR_4g091380 709.138