Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2131 ATGATGCAATTCCTCCTattccttctccttctctttgCTCCTATCTCTGTACTTTCCGTCGACCCAGTGTTCAACGACGACGTTTTGGGGTTGATTGTCTTCAAAGCGGGTCTTCAAGACCCCAAAGCTAAGCTCTCTACTTGGAACGAAGATGATGATAATCCCTGCAAGTGGGACGGAGTCAATTGCGACCCGACGACCCATCGGGTCTCTTCTCTTGTCCTCGACGGGTTTTCTCTTTCTGGGCATATTGATCGAGGCCTCTTGAGGCTACAATTCCTTCGAATTCTATCACTTTCAAAGAACAACTTCACTGGGTCCATAAACCCAGATCTTCTTCTTCGCCTTGGGAGCTTGCAAGTTGTGGATTTGAGCGAGAACAATCTCTCTGGGTCTATACCAGAAGGCTTTTTCAGGCAATGTGGGTCTTTAAGATCAGTTTCATTTGCTAATAACAATCTTTCAGGTAAGATTCCTGATTCTTTGAGCTTTTGTTCCTCATTGGTCTCTGTTAACTTTTCCTCGAATCATTTGTATGGGAAGTTGCCTTCTGGGATGTGGTTTTTGAGGGGATTGCAGTCACTTGATCTGTCCAATAACTTGCTGGAAGGAGAGATTCATGAGGGAATTGAGAATTTGTATGATTTGAGGGAGTTAAGGTTGCAGAAGAATCGTTTCATTGGGAGGCTTCCTGGGGATATTGGGGGATGCTTGCTTTTGAAGTTACTTGATTTCAGTGATAATTTTCTCTCTGGGACACTTCCTGAGTCAATGCAGAGACTAAACTCCTGCACTTCACTCACTTTGCAAGGGAATTCATTCACAGGAAGCATTCCTGATTGGATTGGAGAATTAAGAAGTCTAGAGATGTTGGATTTTTCTGCTAATAGATTTTCTGGCTGGATTCCAGAATCAATAGGAAATCTCAGCTCACTGAATAAATTGAATCTTTCCAGGAATCAATTTACAGGAAACTTGCCAGAGTCAATGGTGAACTGTGTTAAGCTTTTGGCTCTAGATATCAGCCATAATCAATTTGAAGGGTATTTTCCTTCGTGGGTTTCTCTTACCTCCTCACCTGCATCTTATCATAGTCTTCAGGTTTTGGATTTGTCATCAAATGCATTTTCTGGTGAACTTTCACCTAACATTGGGGCCCATAATAGCTTGCAAGTCTTAAATATGTCCACCAATAATATCTCTGGTTCAATTCCAGTGGGTATAGGACAACTGAAATCTTTGTACATTCTTGACTTAAGTAACAACAAGCTTAATGGAAGCATTCCTCCTGAAATAGAAGGAGCATTTTCGCTCGGAGAACTTCGGCTACAGAACAACTTCCTTAGTGGGAAAATTCCTGCCCAAATTAAGAAGTGCTCATCCCTAACATCTTTGATTCTTTCTCACAACAAGCTTACTGGTTCAATCCCAGCAGCAATTGCTAACCTGACTAATCTTCAGTATGTAGACTTGTCATGGAATGAACTCTCTGGAAGCTTACCTAAGGATCTCGCAAATCTTACCCGCCTGTTATCTTTTAATGTCTCCTACAATCACCTTCAAGGGGAGCTACCAGTAGGTGGCTTCTTCAATGTCATCTCTCCCTCATCTGTTTCTGGTAATCCGTCATTGTGTGGTTCTGTAGTCAATCACTCCAGCCCTTCTGTCCATCCCAAACCTATTGTCCTTAACCCAAATTCTTCTTATTCCAACTCTAGCACATCCTCTCTATACCATGGTCACAAGAAGATCATACTAAGTATCTCTGCCCTTATTGCCATTGGTGCTGCTGCTTTTATAATCATTGGTGTGGTGGCTATCACTGTCCTGAACATCCATGTTCGCCAAAAAATCTCACGTTCTGCTGCCTCATTTGCGTTATCTGGTGGTGAGGACTATAGTTGTTCTCCTGCAAATGATCCAAACTATGGCAAGCTTGTAATGTTTTCTGGCGATGCTGGCTTTGATGATGGCGCTCACAATCTCCTAAACAAAGACAGTGAAATAGGTCGTGGTGGATTCGGTGTGGTTTATCGCACGGTCCTTCGAGATGGGCATTCAGTTGCAATCAAGAAGCTTACAGTCTCTGGTTTGATCAAGTCACAAGAAGAATTCGAGAGGGAAGTAAAAAATCTCGGGATGATCCGGCACTCGAATCTTGTGGGACTCAAAGGGTATTACTGGACTTCATCCTTGCAGCTCCTAATTTATGAGTATCTATCCAGAGGGAGTTTACATAAGCTTCTCCATGATGAAGATGAATACAGCAGAAACATTCTTTCTTGGAGACAAAGGTTCAAAATCATTCTCGGCATGGCAAAAGGGTTGGCCCATTTGCACCAAATGAACATAATCCACTACAATCTAAAGTCAACAAATGTTTTGATTGATTGCTCCGGCGAGCCAAAAATAGGAGATTTTGGCTTGGTGAGGCTATTGCCAGTGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGCGCACTCGGATACATGGCCCCCGAGTTTGCATGCCGGACAGTGAAAATAACCGAGAAATGCGATGTGTATGGTTTTGGGATCCTGGTCCTTGAGGTGGTGACTGGGAAAAGACCGGTGGAATATATGGAGGATGACGTGGTTGTTCTGTGTGACATGGTGAGGGGAGCATTGGAGGAAGGCAAGGTGGAGCAATGTGTGGATAGTAGGCTTCTGGGTAATTTTGCTGTAGAGGAAGCAATTCCTGTGATAAAATTAGGGCTAATTTGTGCATCACAAGTTCCTTCAAACCGTCCAGATATGGCTGAAGCAGTTAATATATTAGAGTTGATCCAATGCCCTTCTGAAGGACAAGAAGATCTAGAATAA 2847 0.4261 MMQFLLFLLLLFAPISVLSVDPVFNDDVLGLIVFKAGLQDPKAKLSTWNEDDDNPCKWDGVNCDPTTHRVSSLVLDGFSLSGHIDRGLLRLQFLRILSLSKNNFTGSINPDLLLRLGSLQVVDLSENNLSGSIPEGFFRQCGSLRSVSFANNNLSGKIPDSLSFCSSLVSVNFSSNHLYGKLPSGMWFLRGLQSLDLSNNLLEGEIHEGIENLYDLRELRLQKNRFIGRLPGDIGGCLLLKLLDFSDNFLSGTLPESMQRLNSCTSLTLQGNSFTGSIPDWIGELRSLEMLDFSANRFSGWIPESIGNLSSLNKLNLSRNQFTGNLPESMVNCVKLLALDISHNQFEGYFPSWVSLTSSPASYHSLQVLDLSSNAFSGELSPNIGAHNSLQVLNMSTNNISGSIPVGIGQLKSLYILDLSNNKLNGSIPPEIEGAFSLGELRLQNNFLSGKIPAQIKKCSSLTSLILSHNKLTGSIPAAIANLTNLQYVDLSWNELSGSLPKDLANLTRLLSFNVSYNHLQGELPVGGFFNVISPSSVSGNPSLCGSVVNHSSPSVHPKPIVLNPNSSYSNSSTSSLYHGHKKIILSISALIAIGAAAFIIIGVVAITVLNIHVRQKISRSAASFALSGGEDYSCSPANDPNYGKLVMFSGDAGFDDGAHNLLNKDSEIGRGGFGVVYRTVLRDGHSVAIKKLTVSGLIKSQEEFEREVKNLGMIRHSNLVGLKGYYWTSSLQLLIYEYLSRGSLHKLLHDEDEYSRNILSWRQRFKIILGMAKGLAHLHQMNIIHYNLKSTNVLIDCSGEPKIGDFGLVRLLPVLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDSRLLGNFAVEEAIPVIKLGLICASQVPSNRPDMAEAVNILELIQCPSEGQEDLE 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2131 948 ProSiteProfiles Protein kinase domain profile. 663 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2131 948 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 939 - -
Sto1g2131 948 Gene3D Ribonuclease Inhibitor 305 557 IPR032675 -
Sto1g2131 948 Gene3D Phosphorylase Kinase; domain 1 657 739 - -
Sto1g2131 948 Pfam Leucine rich repeat 438 496 IPR001611 GO:0005515
Sto1g2131 948 Pfam Leucine rich repeat 286 346 IPR001611 GO:0005515
Sto1g2131 948 SMART LRR_typ_2 189 212 IPR003591 -
Sto1g2131 948 SMART LRR_typ_2 483 506 IPR003591 -
Sto1g2131 948 SMART LRR_typ_2 213 237 IPR003591 -
Sto1g2131 948 SMART LRR_typ_2 285 308 IPR003591 -
Sto1g2131 948 SMART LRR_typ_2 309 333 IPR003591 -
Sto1g2131 948 SMART LRR_typ_2 459 482 IPR003591 -
Sto1g2131 948 SMART LRR_typ_2 116 140 IPR003591 -
Sto1g2131 948 SMART LRR_typ_2 411 435 IPR003591 -
Sto1g2131 948 SMART LRR_typ_2 363 387 IPR003591 -
Sto1g2131 948 SMART LRR_typ_2 507 531 IPR003591 -
Sto1g2131 948 Gene3D Transferase(Phosphotransferase) domain 1 740 946 - -
Sto1g2131 948 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Sto1g2131 948 SUPERFAMILY L domain-like 25 276 - -
Sto1g2131 948 Gene3D Ribonuclease Inhibitor 24 304 IPR032675 -
Sto1g2131 948 SUPERFAMILY RNI-like 243 531 - -
Sto1g2131 948 SUPERFAMILY Protein kinase-like (PK-like) 665 938 IPR011009 -
Sto1g2131 948 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 939 - -
Sto1g2131 948 Pfam Protein kinase domain 664 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2131 948 ProSitePatterns Protein kinases ATP-binding region signature. 669 692 IPR017441 GO:0005524
Sto1g2131 948 PRINTS Leucine-rich repeat signature 192 205 - -
Sto1g2131 948 PRINTS Leucine-rich repeat signature 411 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2131 Sto-Chr1 29520013 29522964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2131 1 947 Receptor kinase-like Gene Family AT3G56370 62.162 0.0 1142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Sto1g2131 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2131 - - gmx:100790365 1483.39