Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2128 ATGGGGTGTTTTACTGTGTTGAAGAGTAAGAAGAAAAAGACTGAACAGATCATGCATGTAAAACGTGCCAACCATAAGGAGCATTTACCTACTGTATTGCCTGAACCACAAACTCATACGCGCTCACTGCAGTCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCTGTTGCTAATAAAGTTGCCAACAATAGAACTCGAGCCTTATCTGCTCCATCAACTCTCGATGTAGCTGAACAAGATGCTTTGGCATCTGAAGAGTATGACGAACAAGATGAATTAAAACACCGGGCTGGATCAATAAAGGAGCAGCGGTCATCCAGTCCACAACCTTTACCTCTCCCATCTCCCCAAGGTGGTGTAGTATTAAAGGCAACAAGTAGTTTTAAGTCGGGCACAGCTAGTGGTCCTCTATATGCTTCTGGTCCTTTGCCATTGCCACCTACTGGATCACTACGAAACTTTATGTATGAGGAAATTGCTGCTGCTTGCCATAATTTCTCTTCAGATCGATGCATGTCGGAAGGTCTTTCTTCTGTCATATTTAAAGCTTCCTTTGGCGATGATGCTTCAAGTTCAAAGAAGTTTGAAGCCACCGTCACTCGCCTTCACCCTTCAACCCAGGGTTTGAAGGATTTCATAAGTGAGGTTAATACTATTGCCTCTTTGCAACACCCGAACCTTTGTAAATTGCTAGGTTTTCATGCGCGCGACGGTTCTGAACAAAGAATGTTGGTTTATGAGAGGCTATTCCATGGAAGCTTGGATCGCCTGTTGTATGGGAGATCTGATGGCCCACCTATTGATTGGAACACAAGAATGAAAATTGCTCTATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAACTGCCAACATACAAATTGACAAAGATTTTAGTGCAAAGCTTTCCGGCTATGGTTGTGTTGGACATATTCCCGAGGAAGAGATTGTGGGCAATTCATCTGCAGTGGGAAACCTATCAGTGGAGACACTGGAAAGAGGAATGCTCACCCCAAAGAGCAATGTTTGGAGCTTTGGAATTGTTCTTCTGGAGCTTCTTACTGGAAGAAAGAATCTAGACAGCCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGTCGGCCTTTCCTTGCCGATGATTGTCGATTGTCATTGATCATGGATCCCCAACTTAAAGGCCGATTTCCTTCCAAAGCAGCAAGAACAGTATCTGACATTGCACTGAGATGCCTTCAAAAGGAACCTTCGGAAAGACCCACCATGAGAACTGTTGTGGAGCATCTTAAAAAAATACAGGATATGAAGCACTCTTGTCGGTTTCCACTGCAAGAGCCAGCAGCAATTTCTGGGAAACAGATGTTGAGGTCGCCTAGTCTTAATGGTATCATCAGTCCTACACCTAGGTTGAGTTTTTCACCATCACCACCGTCAGCAGCCCGACCATCTATTTCGCCTCCCAGATGGTCTGGTGTGCCCATCTTGCTACCTCCCCGTGCCTGTTCCTCCAATTTCTCACTGGAGGAGCTTGATCGACAAGAATGCCGGAAGTCATCATCCTCAACCTCCAGGAGGGCTAGCGTGGAAGGATTTTCTATGGCGGAGACTGCAACCTTCATGCTCTCTTCATTTTCTACCATCTTCAGAGGCTCCACGCCATTTCCGTCCTTCTCACTCTCTTCCAAGCCCTCGCTTCTTCCAATGCGCCATTTTAATCCAACACCTTCTACTACTAGGATTTACGCCTTAACTAGCAATGACATCAAAGTGGGCATTAACATTGAAGTCGATGGTGCTCCTTGGCGTGTATTAGAGTTTCTTCATGTTAAACCTGGAAAAGGGGCTGCTTTTGTGAGGACCAAAATGCGAAATTATCTCTCAGGGAACACAATTGAGAAAACTTTTCGAGCTGGAAGTTCGATTGAAGAAGCAAATATAGTCAAGGAAACAAAGCAGTTCACATATAAAGATGGTTCTCAATTTGTCTTCATGGACTTGaatACATTTGAGGAGATTCGTCTACTTGAATCAGAAGTTGGAGACAGAAAGAAATGGCTAAAAGAGGGAATGGACTGCAATTTGCTGTTATGGAATGGAAAAGTTATTGATCTTGATCTCCCTATCACAGTCAAGCTTTCTGTAGTTGATGTGGACCCAGGACTTAAGGGTGACACAGCCCAAGGTGGATCAAAGCCTGCAACACTTGACACAGGAGCTGTTGTGAATGTCCCTCTCTTCATAAATGTAGGTGATGAAATCTTGGTGGACACAAGAACTGGGCAGTACATGAGTCGTGCATAA 2349 0.4449 MGCFTVLKSKKKKTEQIMHVKRANHKEHLPTVLPEPQTHTRSLQSAPPSFRTRVKPIQPVANKVANNRTRALSAPSTLDVAEQDALASEEYDEQDELKHRAGSIKEQRSSSPQPLPLPSPQGGVVLKATSSFKSGTASGPLYASGPLPLPPTGSLRNFMYEEIAAACHNFSSDRCMSEGLSSVIFKASFGDDASSSKKFEATVTRLHPSTQGLKDFISEVNTIASLQHPNLCKLLGFHARDGSEQRMLVYERLFHGSLDRLLYGRSDGPPIDWNTRMKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEIVGNSSAVGNLSVETLERGMLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPSKAARTVSDIALRCLQKEPSERPTMRTVVEHLKKIQDMKHSCRFPLQEPAAISGKQMLRSPSLNGIISPTPRLSFSPSPPSAARPSISPPRWSGVPILLPPRACSSNFSLEELDRQECRKSSSSTSRRASVEGFSMAETATFMLSSFSTIFRGSTPFPSFSLSSKPSLLPMRHFNPTPSTTRIYALTSNDIKVGINIEVDGAPWRVLEFLHVKPGKGAAFVRTKMRNYLSGNTIEKTFRAGSSIEEANIVKETKQFTYKDGSQFVFMDLNTFEEIRLLESEVGDRKKWLKEGMDCNLLLWNGKVIDLDLPITVKLSVVDVDPGLKGDTAQGGSKPATLDTGAVVNVPLFINVGDEILVDTRTGQYMSRA 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2128 782 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2128 782 PANTHER OS01G0588500 PROTEIN-RELATED 46 546 - -
Sto1g2128 782 MobiDBLite consensus disorder prediction 89 125 - -
Sto1g2128 782 MobiDBLite consensus disorder prediction 23 49 - -
Sto1g2128 782 SUPERFAMILY Translation proteins SH3-like domain 600 660 IPR008991 -
Sto1g2128 782 SMART Elong_fact_P_C_2 726 781 IPR015365 GO:0005737|GO:0043043
Sto1g2128 782 Pfam Elongation factor P (EF-P) KOW-like domain 601 656 IPR013185 -
Sto1g2128 782 TIGRFAM efp: translation elongation factor P 600 782 IPR011768 GO:0003746|GO:0005737|GO:0006414
Sto1g2128 782 Gene3D Phosphorylase Kinase; domain 1 151 251 - -
Sto1g2128 782 Gene3D Transferase(Phosphotransferase) domain 1 254 461 - -
Sto1g2128 782 SUPERFAMILY Nucleic acid-binding proteins 664 726 IPR012340 -
Sto1g2128 782 Gene3D - 725 782 IPR012340 -
Sto1g2128 782 SMART EFP_2 664 718 IPR001059 GO:0003746|GO:0006414
Sto1g2128 782 MobiDBLite consensus disorder prediction 482 503 - -
Sto1g2128 782 ProSitePatterns Elongation factor P signature. 747 766 IPR013852 -
Sto1g2128 782 Hamap Elongation factor P [efp]. 598 782 IPR011768 GO:0003746|GO:0005737|GO:0006414
Sto1g2128 782 Gene3D - 662 723 IPR012340 -
Sto1g2128 782 SUPERFAMILY Protein kinase-like (PK-like) 149 456 IPR011009 -
Sto1g2128 782 SUPERFAMILY Nucleic acid-binding proteins 725 782 IPR012340 -
Sto1g2128 782 Pfam Elongation factor P, C-terminal 726 781 IPR015365 GO:0005737|GO:0043043
Sto1g2128 782 CDD S1_EF-P_repeat_1 668 723 IPR001059 GO:0003746|GO:0006414
Sto1g2128 782 Gene3D - 592 660 IPR014722 -
Sto1g2128 782 PANTHER OS01G0822200 PROTEIN 46 546 - -
Sto1g2128 782 Pfam Protein tyrosine and serine/threonine kinase 176 445 IPR001245 GO:0004672|GO:0006468
Sto1g2128 782 MobiDBLite consensus disorder prediction 35 49 - -
Sto1g2128 782 CDD S1_EF-P_repeat_2 726 781 IPR015365 GO:0005737|GO:0043043
Sto1g2128 782 Pfam Elongation factor P (EF-P) OB domain 668 718 IPR001059 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2128 Sto-Chr1 29491494 29504006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2128 149 449 Receptor kinase-like Gene Family AT4G02010 38.235 1.37e-55 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Sto1g2128 PK_Tyr_Ser-Thr 1.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2128 - - gmx:100809117 880.167