Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2123 ATGAGTTACATcggagaagaagagagggaatTTCGAGAGTCTTCTGTAGTTTTGCGGAGTTCTGGAGAATTAGAAGAATCCAAGAAATCGGTCAGGCAAAATGGATCCATTACAACACCACCAACactaaaaattgatgaaaatcttCTGGTTGACCCAAAGCAACTCTTCATTGGGTCAAAAATTGGTGAAGGAGCTCATGGAAAAGTGTATGAAGGAAGGTATGGGGATCAAATTGTGGCAATTAAAGTTCTACATCGTGGGAGCACTTCAGAAGAACGATCAGCCCTTGAAAATCGTTTTGCGAGGGAAGTTATTATGATGTCCCGTGTTCATCATGAGAATCTTGTTAAGTTCATTGGAGCTTGTAAAGATCCTCTGATGGTTATAGTGACAGAGCTGTTACCGGGGATGTCACTGCGAAAATATTTGACCAGTATACGACCTAGGCTATTAGACTGTCACGTGGCTATAAACTTCGCCCTTGATATTGCTCGGGCCATGGATTGCTTACACGCCAATGGAATCATTCACAGAGATTTGAAACCTGGTTATAGTGAGTTCAATAGTTGTGCAGAGCATAATGAAATTTTCCCTGgagACAATCTGTTGCTCACTGCAAATCAGAAGTCTGTAAAACTTGCAGATTTTGGTCTCGCAAGAGAAGAATCTGTAACTGAAATGATGACTGCAGAAACGGGAACTTACCGTTGGATGGCACCAGAGCTGTACAGTACTGTGACGTTGCGTCAGGGCGAGAAAAAGCACTACAACAACAAAGTCGATGTCTATAGCTTTGGAATTGTTTTGTGGGAGCTTCTAACAAACCGCATGCCTTTTGAAGGAATGTCTAATTTGCAGGCTGCTTATGCTGCTGCATTTAAGCATGAGAGGCCTAGCCTTCCAGAAGATATATCCCCAGAGCTTGCCTTTATCATACAATCATGCTGGGTTGAAGATCCAAATTTGAGACCGAGCTTTAGTCAGATCATCCGGATGCTCAATGCATTTCTCTTCACTCTGTCACCACCCTCACCGCCTTTGCCAGAGCCCGAAAATAATGAACCTGTGACGGCGGCGGCGGCAGCAACAGCAACTACGAGTAACGGTACCATAACCGAGTTTTCTACCCGAAACAGAGGAAAGTTTGGATTTCTCCGCCATTTGTTCACTTCCAAGAGAACCAAAAACTAA 1194 0.4221 MSYIGEEEREFRESSVVLRSSGELEESKKSVRQNGSITTPPTLKIDENLLVDPKQLFIGSKIGEGAHGKVYEGRYGDQIVAIKVLHRGSTSEERSALENRFAREVIMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPRLLDCHVAINFALDIARAMDCLHANGIIHRDLKPGYSEFNSCAEHNEIFPGDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKHERPSLPEDISPELAFIIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPPSPPLPEPENNEPVTAAAAATATTSNGTITEFSTRNRGKFGFLRHLFTSKRTKN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2123 397 ProSiteProfiles Protein kinase domain profile. 56 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2123 397 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 20 366 - -
Sto1g2123 397 Gene3D Transferase(Phosphotransferase) domain 1 139 343 - -
Sto1g2123 397 PIRSF ILK 12 343 - -
Sto1g2123 397 PANTHER SERINE-THREONINE PROTEIN KINASE 20 366 - -
Sto1g2123 397 ProSitePatterns Protein kinases ATP-binding region signature. 62 83 IPR017441 GO:0005524
Sto1g2123 397 Gene3D Phosphorylase Kinase; domain 1 44 135 - -
Sto1g2123 397 SUPERFAMILY Protein kinase-like (PK-like) 48 356 IPR011009 -
Sto1g2123 397 MobiDBLite consensus disorder prediction 1 16 - -
Sto1g2123 397 Pfam Protein tyrosine and serine/threonine kinase 58 181 IPR001245 GO:0004672|GO:0006468
Sto1g2123 397 Pfam Protein tyrosine and serine/threonine kinase 201 334 IPR001245 GO:0004672|GO:0006468
Sto1g2123 397 MobiDBLite consensus disorder prediction 1 39 - -
Sto1g2123 397 CDD STKc_MAP3K-like 62 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2123 Sto-Chr1 29468633 29472803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2123 45 397 MAP Kinase Kinase Kinase AT5G01850 69.231 5.18e-180 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sto1g2123 PK_Tyr_Ser-Thr 3.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2123 - - qsu:111990547 582.408