Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2116 ATGCGGGAGTTGTACGACGTTGCCGTTGAAGCAGACGCAGCGCCGTCTACGGCCGAGGACGACGCCTCATCGCGTGTCGTTTTGTTTGGGAAATACGAGCTGAAAAAACTGTTAGGCGTAGGGGGTTTCGCTAAGGTGTATCACGCATTGAATGTGAATACCAAACAGAGCGTAGCCATCAAAGCCGTGAGTAAGCGTAAGGTTTTCGAAGGAGGCCTCACGGCGCAGGTTGAGCGAGAAATCGCTATCATGCGCCGCTTGCGCCATCCGCACACCGTCAAGCTCTTCGAGGTCCTCGCTTCCAAGACCAAGATTTACTTCGTCATGGAGTTCGCCGGCGGCGGCGAGCTCTTCCAAAAGGTCGCCGAAGGACGGTTCTCCGAAGATCTCAGCCGTCGCTACTTCCACCAACTGATCTCCGCCGTCCGCTACTGCCACTCCGCCGGCGTCTTCCACCGCGACCTCAAACTCGACAATCTCCTGATCGACGACAATATGGACCTCAAGGTCTCCGACTTCGGCCTCAGCGCGCTCAACGACCACGTCCGATCCGACGGATTCCTCCACACTATCTGCGGCACGCCGGCTTACGTGGCGCCGGAGGTTCTCGCGAAGAAAGGCTACGACGGAGCGAAGGTCGACATCTGGTCGTGCGGCGTCATACTCTTCGTCCTCACCGCCGGTTACTTGCCGTTCAACGACTACAACCTCGCCGTGATGTACAGGAAGATCTACCGAGGACAAGTTCGGTTCCCGAAATGGTTGTCGCCGGAGCTCCGGCGGTTCCTCTCGCGGTTGCTGGACAGGAATCCGGAGACGCGGATCACCGTCGATGAGATCCTCCGAGATCCGTGGTTCAGCAAAGGATACAGAGAAGTACGAATTCAGCACAAGGAGTTCGAATTGGAGAACGAGAGTCGAATTAGTTCAAGCAGCAAGAGATTGAACGCCTTCGATTTGATCTCGTTTTCATCCGGGTTCGACATGTCGGGTCTGTTTTCCGACCCGGGAGTTTCGGATTGCGTGGAACGAATCGTTTCGGGGGAGAAACCGGAGAGGATAATGGAAAAAGTGGAGCAAGTGGCGAGTGGAGAGCGCGTGAGCGTGAGGAGGAAGGAGAGTGGAGGGTACTGTGCGGCGAAGATGGAGGGGCAGGATGGTAATTTAGTGCTGCTTATTGGGGTTTACCGGTTAACGGATAAATTGGTGGTCGTCGAGATAAAGAAAAGGGAAACCGGAGCTGCAGACGGGCCACAATTTTGGGAGGATAAGTTGAAGCCCCTGCTTCATAAATTAGTTTATAAACCGGAAAGTGAAAGCAGAGAGAGTGAGAAGCAAGAGCAAGAGACTTCTATTCGCCATAAACGTGGATTGCAGAGGAAGGTCAGAGCCGCCTCTTCCAAAGATTTATTTTGGGATCGAATGGCGGTGGTGGAGACGAGGGAGATATTGATTGGGGAAGAAGGGGAtggggtggtgATTCTCTGTGTATTATCAGTCTCTGATGATGCTGATCCTGGACTCTGCACGAGATTTGAGCTCCTTCAATCGGAACAGCTTATCAACCTCCATCTCGAGGCACTTCTGAAACTCTCCTCTCTGTTCCATCTCCTTCATCTGACGATCCAACTCCAGTTCCCTCTCACTCAACATTCTCTCCGTCCTCTCCTTATCCGCTTTCAGCCTCTCCAGCCGCTTCTTGATCGCAATCAGTTCATCCGCCAGCGACGCATCCATCGGCATCGGCATCGTCGAATGAAGGTTCTCCTTGTTGGCGGAATCCGCCATCACCACCAGCGAGATTTCCGCCCGTTCTTGCTTAGATTTGGACTTCGGAAGAGGATCGGCGACGGGAGTAGTGGTGGCCGGAGAGTTCTTCGGCTGAAGAGGAGTCCGGCCAGATCTAGGCCGTAA 1914 0.5376 MRELYDVAVEADAAPSTAEDDASSRVVLFGKYELKKLLGVGGFAKVYHALNVNTKQSVAIKAVSKRKVFEGGLTAQVEREIAIMRRLRHPHTVKLFEVLASKTKIYFVMEFAGGGELFQKVAEGRFSEDLSRRYFHQLISAVRYCHSAGVFHRDLKLDNLLIDDNMDLKVSDFGLSALNDHVRSDGFLHTICGTPAYVAPEVLAKKGYDGAKVDIWSCGVILFVLTAGYLPFNDYNLAVMYRKIYRGQVRFPKWLSPELRRFLSRLLDRNPETRITVDEILRDPWFSKGYREVRIQHKEFELENESRISSSSKRLNAFDLISFSSGFDMSGLFSDPGVSDCVERIVSGEKPERIMEKVEQVASGERVSVRRKESGGYCAAKMEGQDGNLVLLIGVYRLTDKLVVVEIKKRETGAADGPQFWEDKLKPLLHKLVYKPESESRESEKQEQETSIRHKRGLQRKVRAASSKDLFWDRMAVVETREILIGEEGDGVVILCVLSVSDDADPGLCTRFELLQSEQLINLHLEALLKLSSLFHLLHLTIQLQFPLTQHSLRPLLIRFQPLQPLLDRNQFIRQRRIHRHRHRRMKVLLVGGIRHHHQRDFRPFLLRFGLRKRIGDGSSGGRRVLRLKRSPARSRP 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2116 637 SMART serkin_6 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2116 637 Pfam NAF domain 313 370 IPR004041 GO:0007165
Sto1g2116 637 SUPERFAMILY Protein kinase-like (PK-like) 28 287 IPR011009 -
Sto1g2116 637 Gene3D Transferase(Phosphotransferase) domain 1 115 293 - -
Sto1g2116 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Sto1g2116 637 MobiDBLite consensus disorder prediction 436 458 - -
Sto1g2116 637 MobiDBLite consensus disorder prediction 436 455 - -
Sto1g2116 637 Gene3D Phosphorylase Kinase; domain 1 29 114 - -
Sto1g2116 637 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Sto1g2116 637 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Sto1g2116 637 CDD CIPK_C 316 429 - -
Sto1g2116 637 ProSiteProfiles Protein kinase domain profile. 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2116 637 PANTHER - 14 440 - -
Sto1g2116 637 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2116 637 Gene3D Kinase associated domain 1, KA1 311 435 - -
Sto1g2116 637 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 14 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2116 Sto-Chr1 29384866 29398482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2116 28 451 CBL-interacting serine-threonine protein kinases AT5G01820 58.565 9.25e-170 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sto1g2116 Pkinase 2.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2116 - K12761 fve:101291255 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2116 1 29384866 29398482 Sto1g2116 1 29384866 29398482 ECH