Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2114 ATGCACCTTGAAGACTTCTTCATCATAAACAGATGGGGATTTCTGAAGTGCCCTCCATTGCCCATCATTGAAGGCCCATGTCCTACAAACAGTCATACCCACAGAGGAAGCTTGCTTGAATACCTCACTCACCTTCCCTCTGGTGGAGTCATCTGCTGCAAACACCATCAACCATGGTTGATATTCCCATTTTGCTGTTCTTGGAAATCCAAGTTCCGATCGAGCTGGTATATTCTTCTGAGTTTTCCATTCCGATCTGTGTGTTTTCTACTTCAGATCTTTTACTTTCTCACCCATCACTGTGTTGTTTTATTCCATGGTTCTGCTTCGTATCTGAAATCAACTAGGGTTTGGGTCATGAGGAGCATCGATCGGTGGTGTGTTCCTATTGTTCTTTGCTTGCTTATAGCTATTCGACTTGTTCGAGCTGATGATTTTGTTCCTACCGATAAAATCCTCCTGAATTGTGGGGGTCCTCCTGATTCAACTGACGGCGATGGCCGGAAGTGGACCACCGATGTCGGGTCCAAGTTCACTTCATCGGCCGAAAACTCCACCGCTGCGTCGGCGGCGACTCAGGACCCTGAGGTCCCCGAAGTTCCATACATGACTGCTCGAGTATTTCATTCAGAGTTCACCTACAGTTTTCCGGTGGCCCCTGGTCGGAAATTTATCCGTCTCTACTTTTATCCGGCGTCCTATTCTAGCCTTAATGCGTCCAATGCTCTCTTTGCTGTCACCTCACAATCCTATACCCTCTTAAGGAATTTCAGTGTTTCTCAAACCACAGAGGCTTTGAATTTTGCTTTCATTGTGAAGGAATACTTGATAAATGTTGAGGATAACACACTGAATGTGACTTTTACCCCATCTAAGAATGGTTCTAATTCTTATGCATTTGTTAATGGGATAGAGATTGTGTCCATGCCTGATATTTATAGTTCAACCGATGGGACTACGATGATTGTGGGCACACAAACTCCTTACACCATTGATAACAGCACTGCACTTGAGAATGTTTATAGGTTGAATGTTGGTGGGAATGATATCTCGCCCTCCAAAGATACAGGTCTGTTTAGGTCATGGTATGATGATACTCCATATCTGTATGGGGCTGCTTTTGGAGTTACAGAGCCTGCTGATCCAGAGGTGAAAATTGAGTATCCTCCAGGCACTCCTACTTATATTGCCCCTCTTGATGTCTACAGTACTGCAAGATCAATGGGTCCGGATGCCAATGTTAACCAAAATTACAATTTGACTTGGATTTTCTCGATCGACACAGGGTTTTCTTATCTCGTGAGACTTCATTTTTGTGAGGGGACTACAAATATAACCAAGATTAATCAAAGAGTGTTTCAGATATTCCTCTACAATCAAACTGCCGAGAGCCCGGCCGATGTTATAGCCTGGGCAATGGAGTATGGTCTTACACATTCAAATGGTGTTCCTGTGCATAAGGATTATGTTGTATTTGTTCCTACTGGGCAACCACAGCAGGATCTGTGGGTCGCACTGCATCCAGATGTTGCTGATAAGCCTGAGATTTATGATGCGATCTTGAATGGAGTGGAGATATTTAAAATTGATAGTTCAGGTAATCTTGCAGGGGCAAATCCTATTCCTGCTCCCCAACAAGATAAGATTGACCCATCATTGGCGAGACCCTCTCATGGTACATCAAAGAATCAAGCAGGAATAATTGGTGGAGGCGTTGGTGGAGGAGTTGTTTTACTACTTGTTGTTGGACTCTTCGCTTTTGGTGTATTCCGTCGTAGGCAAGGAAAAGATTCTAGTTCGAGTGATGGACCATCTAATTGGctccctctttctctctatGGTAATTCACACTCTGCGGGTTCTGCCAAAACCAACACAACAGGAAGTTATGCATCCTCACTCCCATCAAACCTTTGTCGCCATTTCTCATTTGCCGAAATCCAGGCTGCCACAAAGAACTTTGATGAGGCTTTGGTCCTTGGTGTGGGAGGATTTGGTAAGGTTTACAAAGGAGAAATTGATGGTGGAGCAATGAAAGTAGCAATTAAACGTGGGAACCCACTCTCTGAGCAGGGAGTACATGAATTCCAAACTGAGATTGAAATGCTCTCTAAACTCCGTCACCGTCACCTTGTTTCACTGATTGGCTACTGTGAAGAAAATTGTGAAATGATCCTTGTCTATGATTACATGGCTCATGGAACACTCCGTGAGCATCTATACAAGACTCAAAAACCTCCACTCCCATGGAAACAAAGGCTTGAGATATGCATTGGAGCTGCTCGAGGTTTACACTATCTACACACCGGTGCCAAGCACACCATCATCCATAGAGATGTGAAAACAACAAACATCTTGCTGGATGACAAGTGGGTGGCAAAGGTCTCTGATTTCGGATTGTCAAAAACTGGCCCTAGCTTGGACAACACACATGTGAGTACTGTAGTTAAGGGTAGTTTTGGGTACTTGGACCCAGAATATTTCAGGAGGCAGCAATTGACAGAGAAATCAGATGTTTACTCATTCGGGGTTGTTCTTTTCGAGATACTGTGTGCTCGCCCAGCTTTGAACCCAACCCTTCCTAAAGAACAAGTGAGCTTAGCTGAGTGGGCTTCTCATTGCCAGAAGAAAGGCATTCTTGACCAAATCCTTGATCCTTTTCTGAAGGGGAAGATAGCACCAGAATGCTTCAAGAAATTTGCAGAGACTGCCATGAAGTGTGTGGCTGACCAAGGTATTGACAGGCCATCAATGGGTGATGTGTTGTGGAACCTTGAATTCGCTTTGCAGCTGCAAGAGAGTGCAGGGGAGAATAATGGGAAGGGTTTTGTTGGAAGTGAAGAGGATCAGCCACTGTGTGAAGAAGATTCTAAAGGCAAGAAGGACACTAATGGTTTTGAAGGTAATGTAAGTGACTCCAGAAGCAGTGGAATTAGTATGAGCATAGGTGGAAGAAGCCTAGCCAGTGAAGACTCTGATGGGTTAACGCCTAGTGCTGTGTTTTCCCAGATCATGAATCCCAAAGGTCGTTAA 3033 0.4418 MHLEDFFIINRWGFLKCPPLPIIEGPCPTNSHTHRGSLLEYLTHLPSGGVICCKHHQPWLIFPFCCSWKSKFRSSWYILLSFPFRSVCFLLQIFYFLTHHCVVLFHGSASYLKSTRVWVMRSIDRWCVPIVLCLLIAIRLVRADDFVPTDKILLNCGGPPDSTDGDGRKWTTDVGSKFTSSAENSTAASAATQDPEVPEVPYMTARVFHSEFTYSFPVAPGRKFIRLYFYPASYSSLNASNALFAVTSQSYTLLRNFSVSQTTEALNFAFIVKEYLINVEDNTLNVTFTPSKNGSNSYAFVNGIEIVSMPDIYSSTDGTTMIVGTQTPYTIDNSTALENVYRLNVGGNDISPSKDTGLFRSWYDDTPYLYGAAFGVTEPADPEVKIEYPPGTPTYIAPLDVYSTARSMGPDANVNQNYNLTWIFSIDTGFSYLVRLHFCEGTTNITKINQRVFQIFLYNQTAESPADVIAWAMEYGLTHSNGVPVHKDYVVFVPTGQPQQDLWVALHPDVADKPEIYDAILNGVEIFKIDSSGNLAGANPIPAPQQDKIDPSLARPSHGTSKNQAGIIGGGVGGGVVLLLVVGLFAFGVFRRRQGKDSSSSDGPSNWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIQAATKNFDEALVLGVGGFGKVYKGEIDGGAMKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVSDFGLSKTGPSLDNTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWASHCQKKGILDQILDPFLKGKIAPECFKKFAETAMKCVADQGIDRPSMGDVLWNLEFALQLQESAGENNGKGFVGSEEDQPLCEEDSKGKKDTNGFEGNVSDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2114 1010 PANTHER OS07G0166700 PROTEIN 135 972 IPR045272 GO:0004714|GO:0006468
Sto1g2114 1010 ProSitePatterns Protein kinases ATP-binding region signature. 660 683 IPR017441 GO:0005524
Sto1g2114 1010 SMART serkin_6 654 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2114 1010 MobiDBLite consensus disorder prediction 938 1010 - -
Sto1g2114 1010 CDD STKc_IRAK 660 926 - -
Sto1g2114 1010 ProSiteProfiles Protein kinase domain profile. 654 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2114 1010 PANTHER - 135 972 - -
Sto1g2114 1010 MobiDBLite consensus disorder prediction 951 967 - -
Sto1g2114 1010 MobiDBLite consensus disorder prediction 968 1003 - -
Sto1g2114 1010 Gene3D - 336 530 - -
Sto1g2114 1010 Gene3D - 152 310 - -
Sto1g2114 1010 Pfam Malectin-like domain 154 529 IPR024788 -
Sto1g2114 1010 Gene3D Phosphorylase Kinase; domain 1 616 730 - -
Sto1g2114 1010 Pfam Protein tyrosine and serine/threonine kinase 659 922 IPR001245 GO:0004672|GO:0006468
Sto1g2114 1010 Gene3D Transferase(Phosphotransferase) domain 1 731 944 - -
Sto1g2114 1010 SUPERFAMILY Protein kinase-like (PK-like) 629 927 IPR011009 -
Sto1g2114 1010 MobiDBLite consensus disorder prediction 537 561 - -
Sto1g2114 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2114 Sto-Chr1 29366173 29374714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2114 137 1010 Receptor kinase-like Gene Family AT3G51550 74.943 0.0 1324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sto1g2114 Malectin_like 8.7e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2114 - - gmx:100499644 1409.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2114 1 29366173 29374714 Sto1g2114 1 29366173 29374714 ECH