Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2108 ATGATGCTACAATCCTACTTTGTTACAATACCTACTTTTCTACTCCTGCTTTTGTTTTTCCCAACTTCAGGAGATCTAAATTCAGAAAAGCAGGCCCTCCTTGATTTAGCTGCAGCAGTTCGTCATGGCCAAAAAATCAATTGGAATTCAGCTACCTCAATCTGCAATTCTTGGGTGGGAATCACTTGCAGCCCAAACGGCTCTCATGTGATCGCTGTGCGGCTTCCTGGCGTTGGACTGCGTGGTTCTCTTCCTTCCAATACACTTAGTAAGCTGAGTGGTCTCATGATTCTCAGTCTTCGGTCCAACAGCCTGAACGGAAATCTTCCCAATGACATACTTTCCCATCCTTCCCTCCGCTTCATATATCTGCAATATAACAACTTTTCTGGTGATATCCCTGGTTCTTTGTCTCACCAGCTTAACTTTCTTGATCTGTCCTACAATTCTTTTACAGGAAAAATTCCTGTCTTGATTCAAAACTTGACAAATCTAACTGGATTAAACCTCCAGAATAACTCTCTAATGGGACCAATCCCTGATTTAAACCTCCCAAAGCTCAAGACTTTGAATTTGAGCTATAACAACCTAAATGGTTCAATTCCTTCAGCCCTCCAGAAGTTTCCTGCCTCCTCATTTCATGGGAATCTGATGTTATGTGAACCACATTTACACCAATGTTCTTCAGTTTCCCCTTCTCCCGCACTGTCTCCATCAACTGACTCATCAAAACCAAGTGATCTTAGCAACAAGAAGCTGAGTACAGGGGCTATAGTTGCAATTGCTTTCATAGGTTTTGCTCTGTTTGTTCCACTTCTGATAGTAGTGTTGTGCTATCTTAAGAAAATAAACGGCGAACAAAATGCAGCACCTAAGCAGAAGGATGAAAAGCTTAAGGAGGAGTTTGGGAGTGGAGTGCAAGAACCAGAGAAAAACAAGCTAATATCTTTTGAAAGATGTTCTTATAGTTTTGATCTTGATGATCTATTAAGAGCTTCTGCTGAAGTACTTGGGAAGGGAAGTTGTGGGACGACTTATAAAGCCATCTTGGAGGAGGGTAATACAGTGGTTGTGAAGAGGTTAAAAGAAGTGGTTGTAGGGAAAAAAGAATTTGAACAGCAAATGGAGACTGTGCAAAAGCTTGGTCATCATCCAAATGTTATTCCTATCCGTGCTTACTACTACTCCAAGGACGAAAAACTACTTGTTTATGACTACATAGCAGCTGGAAGCTTATCCAGACTATTGCATGGAACCAAGGGTGCTGGACGAATTCCTCTAGACTGGGAATCCAGATTGAAGATCTCACTAGGAGCTGCTAGGGGTATTGCCCATATCCACTCTACCAGCGGAAGGAAATTTGTTCATGGCAATATAAAATCATCTAATGTGCTTCTCAGACTAGATTTTGAAGGCTGCATATCAGATTTTGGCTTAACTCCTCTAATCAGTTTCTCTGTCCCATCCAGAAGTCCAGGCTACCAAGCACCCGAGGTCGTCCAAACTCGAAAATCCTCCCAGAAATCTGACGTATATTCCTTCGGTGTTGTCCTTCTTGAGATGCTGACTGGAAAAACTCCAGTTCAGTATTCAGGTCATGATGATGTGGTAGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGGGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTTATGAGGTATCCAAATATTGAAGAAGAGATGGTGCAGATGCTGCAACTAGCTCTGGCATGTGTGACAAAGGTGCCTGATATGAGACCTTCAATGGTGGAAGTTGTTAGGATAATTGAAGAGATCAGAGCTTCCAATTCTGAGAATCCACCACTAACATACTTGGCTACGAATGATATCAGCCGGAACGGCGCACCAATAAGGGGAGCATCAGTAATTGGAACTTCATCATTATCAACATTCTGGGCAGCCTGCAACTCCAACTCTGGAATTTGTACTTCATTGTCATCCAAAGGGATTTGCACAATTTCTCCAGAGTCATCAGATGCTAAGGAAGAGCTTGAAATAAACCCAGTAACATTCTTAGCATCAATAGCATCACTATTATCCTTAACCGAAATCGGAGGTTCGTCCAAACGAATTAACTCCTGGACTGACATAGGCTTGATCTCCAAAGATTCAGGCGTAGGAAGGGCGACATTATCAGGTTTAGCAAATTCAGTTGACTCATCGGTTCCGGTGGTTCCAGAAAGTTTGACTTCACTTTGTTGA 2229 0.4235 MMLQSYFVTIPTFLLLLLFFPTSGDLNSEKQALLDLAAAVRHGQKINWNSATSICNSWVGITCSPNGSHVIAVRLPGVGLRGSLPSNTLSKLSGLMILSLRSNSLNGNLPNDILSHPSLRFIYLQYNNFSGDIPGSLSHQLNFLDLSYNSFTGKIPVLIQNLTNLTGLNLQNNSLMGPIPDLNLPKLKTLNLSYNNLNGSIPSALQKFPASSFHGNLMLCEPHLHQCSSVSPSPALSPSTDSSKPSDLSNKKLSTGAIVAIAFIGFALFVPLLIVVLCYLKKINGEQNAAPKQKDEKLKEEFGSGVQEPEKNKLISFERCSYSFDLDDLLRASAEVLGKGSCGTTYKAILEEGNTVVVKRLKEVVVGKKEFEQQMETVQKLGHHPNVIPIRAYYYSKDEKLLVYDYIAAGSLSRLLHGTKGAGRIPLDWESRLKISLGAARGIAHIHSTSGRKFVHGNIKSSNVLLRLDFEGCISDFGLTPLISFSVPSRSPGYQAPEVVQTRKSSQKSDVYSFGVVLLEMLTGKTPVQYSGHDDVVDLPKWVQSVVREEWTAEVFDLELMRYPNIEEEMVQMLQLALACVTKVPDMRPSMVEVVRIIEEIRASNSENPPLTYLATNDISRNGAPIRGASVIGTSSLSTFWAACNSNSGICTSLSSKGICTISPESSDAKEELEINPVTFLASIASLLSLTEIGGSSKRINSWTDIGLISKDSGVGRATLSGLANSVDSSVPVVPESLTSLC 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2108 742 SUPERFAMILY Protein kinase-like (PK-like) 335 598 IPR011009 -
Sto1g2108 742 Gene3D Transferase(Phosphotransferase) domain 1 407 616 - -
Sto1g2108 742 CDD STKc_IRAK 337 601 - -
Sto1g2108 742 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Sto1g2108 742 PANTHER OS05G0480400 PROTEIN 11 610 - -
Sto1g2108 742 SUPERFAMILY L domain-like 43 208 - -
Sto1g2108 742 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Sto1g2108 742 Gene3D Phosphorylase Kinase; domain 1 298 406 - -
Sto1g2108 742 Pfam Protein kinase domain 334 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2108 742 ProSiteProfiles Protein kinase domain profile. 331 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2108 742 PANTHER OS05G0588300 PROTEIN 11 610 - -
Sto1g2108 742 Gene3D Ribonuclease Inhibitor 183 228 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2108 Sto-Chr1 29335071 29338954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2108 12 607 Receptor kinase-like Gene Family AT5G58300 60.720 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto1g2108 Pkinase 5.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2108 - - gmx:100796675 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g2108 1 29335071 29338954 Sto1g2108 1 29335071 29338954 ECH