Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2101 ATGTATCGCAGGTTGTCTGTTGTTTCCTTTGACGGCAGTTATCGAGAATCTAGTCAATTTTTAGTTCCCACCAGCGTAAACTACTGGTCCGCTAGAGCAAGCAGAAAGTTCAAGACTTTTCAACTCAAGGCTGGATTCTGGGAATCAATAAAAACTGGGTTGTTGAAGAATAACTCAACACAAGTCATTGATCCACCTGctacagaagaagaagaagatgaacctCTGCCACAAGAGTTTGTTCTTGTTGAAAAGACTGAACCTGATGGAACAGTTGAACAAATTATATTCTCTTCAGGTGGAGATATTGATATTTATGATCTTCAAGCCCTTTGTGATAAGGTAGGGTGGCCTCGGAGGCCATTGTCAAAATTAGCCGCTGCTTTGAAGAATAGCTATATGGTGGCTTCACTGCATTCAATAAGAAAGTCACCAGGGTCAGAGGGAAATGAACAGAAGATATTAATTGGCATGGCCCGTGCTACGTCAGACCATGCCTTCAATGCTACAATTTGGGATGTCCTAGTTGACCCTGGATATCAGgGTCAAGGCCTTGGTAAGGCTCTTGTAGAAAAATTGATTCGAGCTCTTCTTCAAAGGGATATTGGAAATATAACTCTTTTTGCAGATAGTCAAGTTGTGGAATTTTATCGCAATTTGGGTTTTGAACCTGACCCTGAGGGCATAAAAGGCATGTTTTGGTCTTGCTTGAAGCCAAAGTCCTATTATTTCTCAGTCTTGTTTTTGCTGCTActcattatttttctcttgtcTGGTAAATCCAATAATGCTGATTCTGAAAATGAGGAATCACAAAAGCTCAGAGTTGGTCCAAATAAGAAATTTGGAAGCAATAAAGTTTCAGTTTCAACAGTTGCATTCTTTACATTGGCAATGGCAGCTGCCTCTGGTTTAGGTGCTGTACCCTTCTTCTTTGTGAAGGTTGATCCAAAGTGGGCTGGACTATGCAATGGGATGGCTGGTGGAGTCATGTTGGCTGCAAGTTTTGATCTCATACAGGAAGGGAAGGACCATGGGAATTGGGTTTTTGTGGAGCAGTATGGGGAAGTAAGGATGTTGGATATAAAGGGTGGTGATGCAGCCAAAGTGATTCTGGTGATTGGAATAGTGACTCTGCATTCATTTGGGGAGGCTTCTGGGGTTGGAGTCTCCTTTGCTGGCTCAAAGGGTTTTTCTCAGGGCCTTTTGGTAACTTTGGCAATTGCTGTGCATAATATACCAGAAGGATTAGCTGTGAGCTTGGTGCTAGCATCAAGGGGTGTCTCACCACACAATGCTATGTTATGGACTGTAATTACATCTTTACCTCAGCCAATAGTGGCAGTTCCTTCATTTATATGTGCTGATGCATTTAGCAAATTCCTGCCTTTCTGTACGGGTTTTGCTGCTGGATGCATGATCTGGATGGTTGTTGCTGAAGTTCTCCCTCATGCATTCAAGGAAGCCTCTGCTTCACAGGTTGCATCAGCAGCAACACTTTCTGTAGCATTTATGGAAGCTCTCAGCACCTTCTTTAagaattttagtcttttttttttggtggaaagTAAAGACAGGAAGCCTAAGCAAGACAAGCACGAGCAACACCCTGACCCTGCAGGTCTTCAACAAGAACCCGATTAA 1644 0.4106 MYRRLSVVSFDGSYRESSQFLVPTSVNYWSARASRKFKTFQLKAGFWESIKTGLLKNNSTQVIDPPATEEEEDEPLPQEFVLVEKTEPDGTVEQIIFSSGGDIDIYDLQALCDKVGWPRRPLSKLAAALKNSYMVASLHSIRKSPGSEGNEQKILIGMARATSDHAFNATIWDVLVDPGYQGQGLGKALVEKLIRALLQRDIGNITLFADSQVVEFYRNLGFEPDPEGIKGMFWSCLKPKSYYFSVLFLLLLIIFLLSGKSNNADSENEESQKLRVGPNKKFGSNKVSVSTVAFFTLAMAAASGLGAVPFFFVKVDPKWAGLCNGMAGGVMLAASFDLIQEGKDHGNWVFVEQYGEVRMLDIKGGDAAKVILVIGIVTLHSFGEASGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSLVLASRGVSPHNAMLWTVITSLPQPIVAVPSFICADAFSKFLPFCTGFAAGCMIWMVVAEVLPHAFKEASASQVASAATLSVAFMEALSTFFKNFSLFFLVESKDRKPKQDKHEQHPDPAGLQQEPD 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2101 547 PANTHER BNAA05G29570D PROTEIN 350 522 - -
Sto1g2101 547 PANTHER BNAA05G29570D PROTEIN 272 350 - -
Sto1g2101 547 CDD NAT_SF 155 207 - -
Sto1g2101 547 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 95 243 IPR000182 GO:0016407
Sto1g2101 547 Gene3D - 99 235 - -
Sto1g2101 547 PANTHER ZINC/IRON TRANSPORTER 350 522 - -
Sto1g2101 547 PANTHER ZINC/IRON TRANSPORTER 272 350 - -
Sto1g2101 547 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 104 228 IPR016181 -
Sto1g2101 547 MobiDBLite consensus disorder prediction 526 547 - -
Sto1g2101 547 MobiDBLite consensus disorder prediction 526 540 - -
Sto1g2101 547 Pfam ZIP Zinc transporter 364 492 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Sto1g2101 547 Pfam Acetyltransferase (GNAT) family 105 222 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2101 Sto-Chr1 29283081 29292148 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sto1g2101 Zip 5.1e-10 CL0184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2101 - - rcu:8267972 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0364 6 4096084 4101159 Sto1g2101 1 29283081 29292148 CCT