Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2074 ATGAGAATAGAAGGTGATTTCGAGGGTACCGAAATTAGAACATCATCAAAATTAGAAGCACAAGACATGGCATCAGATTCAGAGTTAATGGATTTGTCTATACCTTCCAATTTGAATCCTCAAATTAAGGAGCAGGAAAACGTTTTGGAGTGCAGCATCAACACTACTACTCCTACTAAGTATGCGAGAGATGGATATCAATGGAAGAAATATGGTCAGAGAGTCACCAGAGATAACCCTTCTCCTAGGGCTTATTTCAGCCATACTTGTGTGGTCGCTGCCTTTCCGATTGCCTATATTTACAATGCTATTTCTCGGTCTGGTGTACTACCTCTCTGTCTCGGCCTTCCTTCTTTCCGGGTTCGATGTCGTTCTGTTTTCGTCTCTCGAAATGTCGAGTCTTTTGTTTACGTTGATAGGGGCTCTGGGCTTCGTGATGATTGTTATGGTGATTTTGGCTTCCTTGTGCATCATAATGGACAAAAAGGAGGAACAAGTCATCACTACTGTGTTGAGTAA 519 0.42 MRIEGDFEGTEIRTSSKLEAQDMASDSELMDLSIPSNLNPQIKEQENVLECSINTTTPTKYARDGYQWKKYGQRVTRDNPSPRAYFSHTCVVAAFPIAYIYNAISRSGVLPLCLGLPSFRVRCRSVFVSRNVESFVYVDRGSGLRDDCYGDFGFLVHHNGQKGGTSHHYCVE 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2074 172 ProSiteProfiles WRKY domain profile. 57 89 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto1g2074 172 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 55 87 IPR044810 GO:0003700
Sto1g2074 172 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 55 87 - -
Sto1g2074 172 Gene3D WRKY domain 47 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto1g2074 172 Pfam WRKY DNA -binding domain 64 87 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto1g2074 172 SUPERFAMILY WRKY DNA-binding domain 56 87 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto1g2074 172 SMART WRKY_cls 62 103 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2074 Sto-Chr1 29090781 29092808 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2074 59 107 WRKY Transcription Factor Family AT1G80840 53.061 1.73e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto1g2074 WRKY 3.6e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2074 - - mnt:21396400 60.4622