Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2037 ATGGTTCCCAGTAGCCGAATTTCCAGTGCTCattttattgttgttattaattTCTGGCTGCTGCTTAGTTGTAGCATCATCACCTATGGGACTGAAACTGATATCTTCTGCTTGAAAAGTATAAAAAATGCACTTGAAGACCCATACAGTTATTTGAAGTCCTCCTGGAATTTCAACAACAACACAGAAGGATTTATCTGTAGATTTATTGGGGTTGAATGCTGGCACCCTGATGAGAACAGAGTCTTGAATCTCAAGCTGTCAAATATGGGACTCAAGGGCCAGTTTCCTCGAGCCATTCAAAATTGCTCGAGCTTGACGGGATTGGACCTTTCGTTAAACAAAATCTCTGGAAGTATTCCTGCAGATATCAACAAGCTTCTCACATATGTGACATCTCTTGATCTATCTTCCAATGAATTGTCTGGGCAGATCCCACAGGGCCTTGCAAATTGTACTTATCTTAATACCCTTAAACTTGACCAAAATAAACTCACCGGGCAAATTCCTCCAGAATTTGGCCTGCTTTCCCGGCTTAAGGCATTTACTGTCACCAACAATTTTTTGACGGGTCCGGTTCCAAATGTAAAAGCAGCCACAGCTGAAAGTTATGCTAATAATCGTGGACTCTGTGGTGCTCCCTTGCCGGATTGCGAGGCCAAGTCTTCCAAGAGTAATAATGCAGTTATAGCTGGAGCAGCTGTAGGTGGGGTGACTGTTGCAGCATTAGGATTAGGAATTGGATTGTTCTTCTTTGTGCGCCGAGTTTCTGTGGCGAGGAAGGAAGAGGATCCTGAAGGAAACAAATGGGCAAGAAATATAAAGGGAACTAAAGGAATCAAGGTTTCGATGTTTGAGAAGTCAGTATCAAAAATGAAATTGAGTGATCTCATGAAGGCTACCAACAACTTTTGTAAAGACAATATTATTGGGTCTGGAAGAACAGGAACTGTGTACAAAGCTGTCCTTGAGGATGGCACGTCACTCATGGTTAAGAGATTGCAGGAATCTCAACACTCAGAGAAAGAATTCCTGTCCGAGATGTCTACACTGGGGAGTGTCAGACATCGTAACTTGGTCCCCCTTTTAGGCTTTTGTGTGGCCAAGAAGGAGAGGCTTTTGGTCTATAAAGATATGCCAAATGGCACTCTTCATAATCACCTGCATCCTGATGATGGTCAGAGCACCATGGAGTGGACTGTAAGGCTGAAAATTGCAATTGGGGCAGCTAAAGGATTAGCATGGCTTCATCATAGCTGCAATCCCCGTATTCTCCACCGGAACATAAGCTCTAAGTGCATCTTGTTGGATGCTGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCTAGACTGATGAACCCAATTGATACACATTTGAGTACTTTTGTAAATGGagaatttggggatttaggtTATGTTGCTCCTGAGTATACAAGAACATTGGTGGCTACACCTAAGGGGGATGTTTATAGCTTTGGGACTGTTCTTCTTGAGTTGGTGACTGGTGAAAGACCTACCCATGTGGCTAAAGCTCCGGAAACGTTTAAAGGAAATTTGGTTGAATGGATTACCCATCTCTCAAGCAACTCTCAACTCCATGATGCCATTGATGAATCATTAGTTGGAAAGGGTGTTGATAATGAgcttttccaatttcttaaggtTGCTTGCAATTGTGTTTCCCCAAATCCAAAGGAAAGGCCTACTTTGTTTGAAGTATACCAGCTTCTAAGAGCCATTGGGGAAAGGTACAATTTCACAACTGAGGATGAGATCTTGCTACCTTCAGACATTGGTGAAGCTGATAATTTAGAGGAACTTATTGTAGCTCGAGAGGAGTAA 1845 0.4146 MVPSSRISSAHFIVVINFWLLLSCSIITYGTETDIFCLKSIKNALEDPYSYLKSSWNFNNNTEGFICRFIGVECWHPDENRVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSLNKISGSIPADINKLLTYVTSLDLSSNELSGQIPQGLANCTYLNTLKLDQNKLTGQIPPEFGLLSRLKAFTVTNNFLTGPVPNVKAATAESYANNRGLCGAPLPDCEAKSSKSNNAVIAGAAVGGVTVAALGLGIGLFFFVRRVSVARKEEDPEGNKWARNIKGTKGIKVSMFEKSVSKMKLSDLMKATNNFCKDNIIGSGRTGTVYKAVLEDGTSLMVKRLQESQHSEKEFLSEMSTLGSVRHRNLVPLLGFCVAKKERLLVYKDMPNGTLHNHLHPDDGQSTMEWTVRLKIAIGAAKGLAWLHHSCNPRILHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGERPTHVAKAPETFKGNLVEWITHLSSNSQLHDAIDESLVGKGVDNELFQFLKVACNCVSPNPKERPTLFEVYQLLRAIGERYNFTTEDEILLPSDIGEADNLEELIVAREE 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2037 614 SUPERFAMILY Protein kinase-like (PK-like) 282 578 IPR011009 -
Sto1g2037 614 Pfam Leucine rich repeat N-terminal domain 33 75 IPR013210 -
Sto1g2037 614 ProSiteProfiles Protein kinase domain profile. 304 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2037 614 Gene3D Phosphorylase Kinase; domain 1 265 377 - -
Sto1g2037 614 Gene3D Transferase(Phosphotransferase) domain 1 379 595 - -
Sto1g2037 614 Pfam Protein kinase domain 306 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g2037 614 CDD TM_EGFR-like 230 261 - -
Sto1g2037 614 SUPERFAMILY L domain-like 32 196 - -
Sto1g2037 614 Gene3D Ribonuclease Inhibitor 32 219 IPR032675 -
Sto1g2037 614 PANTHER RECEPTOR-LIKE PROTEIN 55 5 592 - -
Sto1g2037 614 PANTHER LRR RECEPTOR-LIKE KINASE 5 592 - -
Sto1g2037 614 Coils Coil 602 614 - -
Sto1g2037 614 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Sto1g2037 614 CDD STKc_IRAK 310 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2037 Sto-Chr1 28739776 28742004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2037 12 592 Receptor kinase-like Gene Family AT3G28450 46.259 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Sto1g2037 Pkinase 8.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2037 - - jre:108988966 951.814