Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g2006 ATGGATGATTATCAAGAGATGGAGAGGTTTGGGATGGAAAATGATTTTGAAGATGGCCAATGGATTGGCAATGAGTTCTACTACAGAAAACGCAAAGAAAAACGCACTCAAACCAGAGAAGATGTTCTTTATGGGGTTTTCGCAGACTCTGATGACGATGACGATGATTATTCCAACAGAAAACGCAGAAAAGATCGGGATTTCTCTAAGAAGCCTGACCTAACAAAGCCTGTGAATTTTATCTCGACTGGCACTTTTATGCCTAATCAGGATGCTGATAACAAATCTAACgaacagaaagaaaaagaaaattttgttaGTGAGGATAGGCCAGGTATAGGTCTTGGTATGGGAACTACTAGCACTTCTGGATCTGGTTTAGGTTTCAATTCTAGTTATCACGAAAATGCTTCTGATGATGAGAATAATGACAATAATTTTCTGCCTACGGCATTTGGAAAGAAAATTAAGGAGGGAGCAATGagaagggagagggaaagggagagagcaaaattagaaaagaagagaggTCAAGGTCAAACTCAAGGTCAAGATAGATTTCAGGATGTCGGGAAGTTTGAGAAACATACAAAGGGAATTGGATTGAAGCTGTTGGAGAAGATGGGTTATAAAGGAGGTGGTCTTGGGAAGAATGAGCAAGGTATTGTGGCTCCTGTTGAGGCAACTTTGAGAGCTAAGAATTCGGGCATTGGATTTAATGATGCCAAGGAAACTACTTCTTTGCCGGTTGAGAAGAAGCCATTGCCAGAAGTTACTCAACCCACAGTTGCTAGAGCCAAAGAAAGGTTATGGTCTAAGCAATCGAgatcaaagaagaagaaggatgaggATTATTATATTACTGCTGAAGAGTTGTTAGCAAGCAAGCTAGAACAGGCTTCAGAGGTTGTTCAGAAGGTTTTTGATATGCGAGGGCCACAGGTTCGAGTAATTACTGATTTATCTGATTTGAATGCTGAGGAGAAGGCTAAGGAAAATGATATTCCGATGCCAGAGCTTCAGCATAATGTGGGGTTAATTGTTAGGTTGGCTGAAGCTGATATCCAAGAGATTGATAGAAATttgaggagagagagggagacagCACTTAGcttgaaaaaagagaaagagaagttaGAAAATGAGGTAGCACTCCAAAAGAAGCAACTGGAAAATTTGGAGGAAATAACTAGAGTGTTGGACCAAGTGGGAGAAGAGAATTCCATGGGGACATTGTCTTTGGATTTGCTTGCACAGTGCTTTAGTGATCTGCAGAAAAGATATGCTGATAGCTATAAGTTGTGTAACTTGTCATGTATTGCTTGCTCGTATGCTTTGCCTTTATTTATTAGAGTATTCCAAGGATGGGATCCTCTTCGAAATCCGTCGCATGGGTTGGAGTTGGTATCACTGTGGAAAGCATTGCTTCAAGGAGAAGAATGCTTCGATATCTGGGATGTAACATCACCTTATACACAATTGATTTCTGAAGTTGTGTTACCAGCTGTCAGGATTTCTGGAATCAATACCTGGCAAGCACGGGATCCTGAGCCAATGTTACGATTTTTGGAGTCATGGGAAAGGCTGCTTCCGTCTTCAGTTCTTACTTCCATATTGGACAATATAGTCATGCCAAAATTGTCGAGTGCTGTAGATACATGGGAACCACATCGTGAGACAATTCCTATCCACACTTGGGTGCATCCATGGTTACCTTTGTTAGGACACAAGTTAGAGGGAATGTACCAGATGATACGCTTCAAATTGAGTACTGTTCTCGGTGCCTGGCACCCGAGTGATGGTTCTGCTTATGCTATATTGTCACCTTGGAAGACTGTATTTGATTCAGCAAGTTGGGAACAGCTTATGATTCGCTTTATTGTGCCAAAATTGCAGCTAGTCTTGCAAGAGTTTCAAGTGAACCCAGCAGATCAGAAGCTTGATCAGTTTTATTGGGTGATGAATTGGGCTTCTGCTGTTCCAATTCATCTGATGGTTGATATAATGGAGAAGTTCTTCTTCACGAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAATCCCAATTTTGAAGAAGTTACAAAATGGGAACTTTTGGCCAATGAAAGTATCCGATATCAACTTAACCGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCtggtttgaaagaaaatatCAGCTATCTTAGGGTTCTTGAGCAAAGGCAGTTTGAGGCTCAGCAGAAAGCAGCAGCGAATGCTCCACCCCAAGCTGCTTCAAACTTGGGTGGTTCTGCCCATATGGATGGTGTGGCTGGTGTACATGAGATGAGCTTGAAGGAAGTCATTGAAGCCCATGCCCAACAACATGGTTTACTATTCAAGCTTAAACCTGGAAGAATGCACAATGGTCATCAAATATATGGGTTCGGTAATGTCAGCATTATAATAGACTCTCTAAATCAAAAGGTATATGCCCAAACCGACGAAGCATGGTCTTTGGAATCTCTCCAAGGGTTGCTAGAGTTGCATAATAAATCCCTTAGCCGGAGACGCTGA 2562 0.3938 MDDYQEMERFGMENDFEDGQWIGNEFYYRKRKEKRTQTREDVLYGVFADSDDDDDDYSNRKRRKDRDFSKKPDLTKPVNFISTGTFMPNQDADNKSNEQKEKENFVSEDRPGIGLGMGTTSTSGSGLGFNSSYHENASDDENNDNNFLPTAFGKKIKEGAMRRERERERAKLEKKRGQGQTQGQDRFQDVGKFEKHTKGIGLKLLEKMGYKGGGLGKNEQGIVAPVEATLRAKNSGIGFNDAKETTSLPVEKKPLPEVTQPTVARAKERLWSKQSRSKKKKDEDYYITAEELLASKLEQASEVVQKVFDMRGPQVRVITDLSDLNAEEKAKENDIPMPELQHNVGLIVRLAEADIQEIDRNLRRERETALSLKKEKEKLENEVALQKKQLENLEEITRVLDQVGEENSMGTLSLDLLAQCFSDLQKRYADSYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVSLWKALLQGEECFDIWDVTSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLESWERLLPSSVLTSILDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGMYQMIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSASWEQLMIRFIVPKLQLVLQEFQVNPADQKLDQFYWVMNWASAVPIHLMVDIMEKFFFTKWLQVLYHWLCSNPNFEEVTKWELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAANAPPQAASNLGGSAHMDGVAGVHEMSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQTDEAWSLESLQGLLELHNKSLSRRR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g2006 853 Coils Coil 348 396 - -
Sto1g2006 853 MobiDBLite consensus disorder prediction 116 149 - -
Sto1g2006 853 Pfam Tuftelin interacting protein N terminal 2 104 IPR022159 -
Sto1g2006 853 Pfam G-patch domain 197 238 IPR000467 GO:0003676
Sto1g2006 853 PIRSF TFIP11 1 848 IPR024933 -
Sto1g2006 853 SMART G-patch_5 195 240 IPR000467 GO:0003676
Sto1g2006 853 MobiDBLite consensus disorder prediction 156 180 - -
Sto1g2006 853 Pfam GC-rich sequence DNA-binding factor-like protein 415 681 IPR022783 -
Sto1g2006 853 PANTHER TUFTELIN-INTERACTING PROTEIN 11 7 839 - -
Sto1g2006 853 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 7 839 IPR045211 GO:0000390
Sto1g2006 853 MobiDBLite consensus disorder prediction 76 93 - -
Sto1g2006 853 ProSiteProfiles G-patch domain profile. 197 242 IPR000467 GO:0003676
Sto1g2006 853 MobiDBLite consensus disorder prediction 94 108 - -
Sto1g2006 853 MobiDBLite consensus disorder prediction 54 73 - -
Sto1g2006 853 MobiDBLite consensus disorder prediction 32 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g2006 Sto-Chr1 28481441 28484032 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g2006 200 269 C2H2 Transcription Factor Family AT5G26610 37.500 2.50e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g2006 K13103 - gmx:100781621 1348.18