Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1949 ATGGAGAGGGTTTCAGAGCCGAAGACACTTCCTCGGATGTTGCCTGTCCTAGTTGAGGTATCAAATGCACACACAAGTACAGGCAGGAAAGATAATCAGAGATCAAATGCACAGGAGGCTTCGAGTATGCGTGGGATTTCAGTAAGAGAAGTGCATCAGCTATCGAAAGCACGAGATGGCCCTATCACACGGCTGGCATCCATCAGAGAAGTGGCGCAATTATCAAATGCAAGGATAGTTTTGGTAAGAGACGATACGGGATTTGATCCTCCAGCTTCTCAAGAATCTGTCGCCTTTGCACCTGCAAGAACATGGAAAGGGAAAGCCTCTTTGCCAGAACCGGAAGAACTTATACCTGATGTTGAGGCATTAAAGGGCAGTTTTGATTTATTTGAGGAAGGAGGTCCGAGTTCATTTGCTGGTGCTAGTCATCCCCCTGAACCTGTTGATACAGATCTGATGAGAACAGTTTATGTCCCAATAGGTCAAAACAAATCTGAGGCTGGAGGCTTAATGAAGAGCTTTTCCATGAAGGGTTCTGTCTTAGAAGATCTCTCAATTCGTGTTCCCCCTAAAAAACTGAGTCCGGCAGTTCTTTCTCCTGCAGGAAGTCCTGATGAAGAACAAAATGACATGGGAAACTTATCCTCTCCAGTTTTGGGTCCTCGTGCTTCACAGAATACTGAGCGCTCTCTCCTTCCCCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCAAGCGGCAATGTCAGTCCACATAGTAGTATTGATAGTACTGGTGTCGTCACAGCAATGAGCATTGCTAATAGTTGTGCAAGTACATATCGTAGTGATGCGCTCACTAGTGATGGCATGCTTAGTTTAGACAGGAACTTTGATAGTACTAAGGGGAGTGTGCGGGGTGATTCTCTAGAGAGTACAAAAACTAGTGCTAGTCAAGCAAGTGATAGCAGTGGGTTCAGTGATGACAGCAACTGGAGCAACATTACTGGTAGCGCCAATAAGCCTCACAAAGGAAATGATCCTAGGTGGaaggctatccttgctatccgAGCAAGGGATGGAATTTTGGGCATGAGTCATTTCAAGTTGCTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTTTATCTCTCAGAGCTGAGTGCAACTCGGTGCTATTTTGCAATGAAAGTTATGGACAAGGCATCCCTAGCAAGCAGAAAGAAGCTGACTAGAGCACAGACAGAGAGGGAGATATTGCAGCTGCTGGATCATCCATTTCTGCCAACTTTGTATACACATTTTGAGACTGATAGATTTTCCTGTTTGGTGATGGAATACTGTCCTGGGGGTGACTTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCGGAGTATGCTGCTCGTTTTTACGCTGCGGAGGTCCTGCTAGCACTTGAATATCTTCACATGCTTGGAGTAGTCTACCGAGACCTTAAACCTGAAAATGTGCTGGTCCGAGATGATGGTCACATAATGCTTTCGGACTTCGATCTTTCCCTTAGATGTGCTGTTTCGCCAACACTGATTAGAACTTCGTATGATGGTGACCCGTCAAAACGAGCTGGTGGTGCATTCTGTGTCCAGCCTGCTTGTACTGAGCCTTCCTCTGTTTGCATCCAACCTGCCTGTTTTATTCCTCGGCTCTTCCCACAGAAAAACAAGAAATCGCAGAAGCCTAGAGCTGAGCCTGGGTTATCAGCCAGCACGCTTCCAGAGCTTGTGGCCGAGCCAACTTCGGCTCGGTCTATGTCCTTTGTTGGAACTCATGAATACCTTGCCCCAGAAATCATCAAAGGAGAAGGTCATGGCAGTGCAGTTGATTGGTGGACCTTTGGAATTTTCTTGCACGAGCTATTATATGGTAAAACCCCTTTTAAAGGATCAGGAAACCGTGCTACGCTGTTCAACGTGGTGGGCCAGCAGCTTAGATTTCCAGAGTCACCGGCAACCAGTTATGCCAGCCGGGATCTGATCCGAGGCTTGCTGGTGAAGGAACCACAGCATCGTCTCGGAGTGAAGAGGGGTGCCACCGAGATCAAGCAGCACCCGTTCTTTGAAGGTGTGAACTGGGCTTTGATTAGATGCAGCACACCACCAGAAGTGCCGAGACCAGTCGAGAGTGAGCTACCCGGGGCTGGGAAGTTCGGACCACCAGATACAGTCGGCAGTAATAGTAAGAGGATAGTAGGTACTGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2280 0.468 MERVSEPKTLPRMLPVLVEVSNAHTSTGRKDNQRSNAQEASSMRGISVREVHQLSKARDGPITRLASIREVAQLSNARIVLVRDDTGFDPPASQESVAFAPARTWKGKASLPEPEELIPDVEALKGSFDLFEEGGPSSFAGASHPPEPVDTDLMRTVYVPIGQNKSEAGGLMKSFSMKGSVLEDLSIRVPPKKLSPAVLSPAGSPDEEQNDMGNLSSPVLGPRASQNTERSLLPPDSEEKECVWDASLPPSGNVSPHSSIDSTGVVTAMSIANSCASTYRSDALTSDGMLSLDRNFDSTKGSVRGDSLESTKTSASQASDSSGFSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFKLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSYDGDPSKRAGGAFCVQPACTEPSSVCIQPACFIPRLFPQKNKKSQKPRAEPGLSASTLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVESELPGAGKFGPPDTVGSNSKRIVGTDMKSGGKYLDFEFF 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1949 759 ProSiteProfiles Protein kinase domain profile. 366 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1949 759 Pfam Protein kinase domain 596 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1949 759 Pfam Protein kinase domain 367 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1949 759 MobiDBLite consensus disorder prediction 207 232 - -
Sto1g1949 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Sto1g1949 759 MobiDBLite consensus disorder prediction 21 47 - -
Sto1g1949 759 MobiDBLite consensus disorder prediction 195 240 - -
Sto1g1949 759 Gene3D Transferase(Phosphotransferase) domain 1 594 716 - -
Sto1g1949 759 PANTHER FLIPPASE KINASE 1-RELATED 71 759 - -
Sto1g1949 759 Gene3D Transferase(Phosphotransferase) domain 1 450 518 - -
Sto1g1949 759 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 71 759 - -
Sto1g1949 759 MobiDBLite consensus disorder prediction 298 343 - -
Sto1g1949 759 MobiDBLite consensus disorder prediction 716 743 - -
Sto1g1949 759 MobiDBLite consensus disorder prediction 298 339 - -
Sto1g1949 759 Gene3D Phosphorylase Kinase; domain 1 364 449 - -
Sto1g1949 759 MobiDBLite consensus disorder prediction 21 43 - -
Sto1g1949 759 SUPERFAMILY Protein kinase-like (PK-like) 348 722 IPR011009 -
Sto1g1949 759 CDD STKc_phototropin_like 364 718 - -
Sto1g1949 759 SMART serkin_6 366 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1949 Sto-Chr1 27861504 27865918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1949 1 759 AGC Kinase Gene Family AT2G44830 67.176 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sto1g1949 Pkinase 5.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1949 - - gmx:100792314 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1949 1 27861504 27865918 Sto1g1949 1 27861504 27865918 ECH