Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1905 ATGGAAGTGAGTCAGCACAGCAAATACTTCTGTGAGTTCTGTGGAAAGTATGCTGTTAAGAGAAAGGCTGTGGGTATATGGGGCTGCAAAGATTGCGGAAAAGTGAAAGCTGGTGGTGCTTACACATTGAACACTGCAAGTGCCGTGACAGTCCGGAGCACCATAAGGAGGTTGAGAGAGCAGACTGAGGGTTGA 195 0.4821 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1905 64 Pfam Ribosomal L37ae protein family 1 60 IPR002674 GO:0003735|GO:0005840|GO:0006412
Sto1g1905 64 PANTHER 60S RIBOSOMAL PROTEIN L37A 1 63 - -
Sto1g1905 64 Gene3D - 1 64 IPR011331 GO:0003735|GO:0005840|GO:0006412
Sto1g1905 64 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 1 63 - -
Sto1g1905 64 SUPERFAMILY Zn-binding ribosomal proteins 1 54 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1905 Sto-Chr1 27394128 27394518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1905 1 64 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 95.312 1.11e-41 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1905 K02921 - nnu:104606392 136.346
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1905 1 27394128 27394518 Sto1g1905 1 27394128 27394518 ECH