Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1896 ATGTCCTTCAATCAATCAAGGTCCGATAAGAGCGAGACTCTGTACCGTAAATCCGGGCGATCAGGAGGGAACTTCAATCAGCAGCAGCGAGGTTCCGGTGGAACGTATGTGAAGGGCGGTGGCGGCGGGCCCGCGCCTTCACCCTCGATCAACTCGGGTTCCACACAGCCCTCTAATCGGAGGGCTAATAATGCACATGGTGGGCAATCTAAGGTAAACCCTTCCACTGTGAATTCAGCTGAGTCTCACAGTGCTTCTACAGGCGGTATGATACCAAATGGAGCCCATTTGCAACAATTACCTGGAGCGTCTGATGCACCAGCTACAAATGCAACCGCCAAGTCAACTGAAGCCTCATCTGCACATAAGAGCACCAGAGTTGCTCCAAAAGCTCCAACTCCTCGACCTCCCGCCATGAATTCTGATCCTGCAGCTCCTACAACCCCTGCTAAAGGAGATCCGTCCAAGCAATTTGCTTTCCAGTTTGGGTCCATTAGTCCTGGTTTTATGAATGGGATTTCGATTCCTGCTCGAACAAGCTCAGCTCCTCCTAATTTGGATGAGCAGAAAAGAGACCAGGCTCGTCATGATTCTTTAAGACCTGTTCCTTCAGTACCAACACCTCCAAAACAGCTGCCAGCAGCAAGGAAGGATTCAGGTGTTGCTGATCAATCTAATGCTGGGGAGACTCATTCAGTGAACAAAGCCAAAAAGGATGCTCAGTTGCCAGTTTTGCCCCCAGCAAGCCAGGTGCAGAAGCCGTCTGTTCCTTTGACTGGGATTTCAATGGCAATGCCATACCACCACCAATCACAGGCATCTGTTCAGTTTGGTGGTCCTAGTCCACAGATTCAATCTCAGGGTATGCCAGCGGCATCTCTTCAAATGCCTATACCTATGCCTTTACCTATGGGAAATGCTGCACAAGTACAACAGCAGGTTTTTGTTCCAGGTCTTCAACCTCTTCCTATTCATCCTCAGGGAATCATGCATCAGGGCCAAAACATGAGTTTCACTCCGCAAATGGGTCCTCAATTGCCTCATCAGTTAGGCAGCATGGGCATTAACATCAACCCTCAATATCCTCAGCAGCAAGGAGGAAAATTTGCTACTCCCCGTAAAACTACTACTGTCAAGATAACTCATCCTGAGACACATGAAGAGCTACGGCTTGACTTTGACAAAAAGGCAGATTCATATTCGGATGGTGTGTCATCAGGTGCGAGGTCTTATTCTAATGTGACTTCTCAGAATCAACCTGTTCAATCATTTGCTCCTTCCCATCCCATTAATTATTATCCATCAAGCTCTTACAGTAACAGCTCTCTTTTTTTCCCACCTAGTTCTGTTCCTTTATCAAGCAGCCATATAACTCCTAATTCTCAGCAACCAAGGTTTAATTATCCAGTGAACCATGGCCCACAAAATGTGAGTTTCAACAATCAAATAAACCTTGGTTCCCTGCCTGTTAATAAGACTGGAACTTCTATTCCTGGAAACGTTGAAGCACCCAATCTGGAACATTCCCGTGATGTGCATAAAGTAATTCCACCAGCTACATCAGGTGTGACTTCTGTGAATATCAAGCCAATTGGTGGCTCTGGTATTGTGGATTCGTCACTCTCCAGTGCTAGTATTACTGGGGCATCTGGTGATGCTAGCTCCTCTGTGCCTCAAAAGGGGTCTGAAACCTGTTCTGAAATTTCTTCTCAACAGTCTAAGTCACCCAGAGATTCTTCAGTTTCAAGCCCGTTGCCAAAACAACCAGCTTCAGGATCTTCTGAGAAGTTATCAAGTACTCCCTCCATGCCTACCTCAGTTGCTGTGAGTGAGAATTCTGCCTCAGTTGTGTCCAACAATGAAGGCAGAAGAAAGGAATCACTTAGTAGGTCTAACTCTTTGAAAGATAATCAGAAGAAAATGGGGAAGAGAGGCCAATCACAGCATCAGGTTCCTGTACAATCTCCTACAGTGGCTAATGTACCTTCTCAAACTGTTGATAGTGTTATGCCTGATCATGGAGTTTCTGAAACTTCAGAAACTAAAAGAAACGATTGTGCAGCAATAACCAGTGAAGATATCCCTGCCACACCATCAACCACAGCTAGTGGTGGCAGCGTACCTAATGCTGTTGAAATTAAGACTGACTGTTCTGCAGAAGGTTCTGTTCATGTTTCAGATGAAGGAGCTGGTGCTCTTGCTGTTGATAATTTGAACAATCACAAGCATGATAAACTAGAGGACTCATCACTACAGAATAAACTATCAAAGTTGAATATTCAGGAAATGGGTGATAAAAATGACCGATCTTCTGAAGTATTTAAACAAAATGTTAATGAGAATGGAACTGATTGTAAACAAACAGAACAAGAAGCGACGAAGGTAACCACTGAGTTTCGAACCTCAAAGACGGTACAACAAAGACAGGAATCACAGAATGAATCTACAAATTATAGATCAGAATCTGTTACGAAGGCTGACGATTTAGATATCTCTTTAAATAGAAATGATAGTACAGTTAGCAATGATTCTATTGCAAATTCTGCTGCATCTGATAAGAATTCTGGTGATCTTCCAGAAGTAACATCCAAACACAGCAAAGAAGGCGCAGATAATGCGGACAGTGGCTTGGCGTCCCTTCCTGTGTCAGGTAACAAGGATCGTCCCATTTCAGAGCAAAATAAGGTGAAAACTACATccaaagggaagaagaaaaggagggAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGAcctgaggaaaagaaagaagttGTAAGTACAGAGAGCACGGAAAGTACTTCTGGGAGTTTGACGCAGTTGACTCAAGATGCTGCTCAACCAGATGCAATTGCAAGTGAGAAAAATGGACAGAATAAAGTGGAGCCTGATGACTGGGAGGATGCAGCTGACATGTCTACCCCGAAATTGGAAGTTGCAGATAAATCTCCTCAGGATAGTGATGGGAGTGGACTTACAGCCAAAAAATACTCTAGAGATTTCCTACTGAAATTCGCAGAGCAATGCATTGATCTTCCTGAAGGTTTTGAAATTCCGGCAGACATTGCTGAGGCATTGATGAATGCTAATATTGGTGGTTCTCATGTTGAACGTGACTCACATCCTAGTCCAGGAAGAATTATAGATAGGCCAGGTGGGATGTCTCGAATGGACCGCCGCGGCGGTGGGCAGTTTGAGGAAGACAGGTGGAGTAAGGTTCCTGGACCTTTTAATTCAGGACGTGATATGCGAATTGATGGTTTTGGAGGTAATCCCGGATTTCGACCTGTTCAAGGAGGCAATTTTGGTGTTTTAAGGAACCCCCGTGCACAGACCCCTCTGCAGTATGCTGGAGGGATCCTTTCTGGGCCAATGCAATCCATGGGAAATCAGGGAGGTATGCAAAGAAATAGCCCTGATGGTGAGAGGTGGCAACGTACTTACCAACAGAGGGGTTTAATTCCTTCTCCTCAAACTCCATTACAGATGATGCACAAAGCTGAGAAGAAGTATGAAGTTGGTAAGGTGACAGATGAGGAACAGGCAAAGCAGAGGCAATTGAAAGCCATCTTAAACAAGCTAACTCCTCAGAATTTTGAGAAACTCTTTGAACAGGTAAAAGCAGTTAATATTGACAATGCTGTCACTCTCACTGGTGTCATCTCACAAATATTTGAGAAGGCTTTGATGGAGCCTACCTTTTGTGAAATGTATGCAAACTTCTGCCTACATCTAGCTGCTGAGTTGCCTGATTTCAGCGAAGACAATGAAAAGATAACTTTCAAGAGATTATTATTAAACAAGTGCCAGGAGGAATTTGAGAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGCTGATGAGGGTGAGGTTAAACAGTCTGatgaagaaagggaagagaaaagAGTCAAGGCAAGAAGACGCATGTTGGGTAATATCAGATTGATTGGAGAGTTATATAAGAAGAAAATGTTGACGGAGAGAATAATGCATGAGTGCATCAAGAAGTTACTGGGTCAGTATCAGGACCCTGATGAGGAAGACATTGAAGCTTTGTGTAAGCTTATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTGTTGTCAAATAACATGAGTTTATCTTCGAGGGTGAGATTCATGTTGAGGGATGCTATTGATTTGAGGAAGAATAAGTGGCAACAAAAGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTGCATAGAGATGCTGCCCAAGAGAGGCAGGCCCAAACTGGTAGGCTAAGCCGTGGTCCAGGAAACAATCCATCAGCAAGAAGGATGCCAATGGAGTTTAGTCCAAGAGGGTCATCTATGTTGTCTTCTCCTAACACCCCAATGGGACTTCGTGGGCTGCCTACTCAAGTTCGCGGTGGTGGGTCTCAGGATGTTCGCCAGGATGATAGGCATTCATATGACGCTAGAAATTTGTCGGTTCCCTTGCCTCAAAGACCTTTAGGTGATGATTCTATAACCTTGGGACCCCAAGGTGGTCTTGCAAGAGGAATGTCCTTTAGAGGGCCAGACTCTCGAAGAATGGCTACTGGTCTTAATGGTTTTAGCAATTCATCAGAGCGTGTGATGTACTCCTCTAGGGAGGATCTCACGCCGAGATATGCTACAGATAGGTTCTCTGGTCCCACTGGTTATGACCAATCAGGTGTACAAGAGCGTAATATGAATTATGGTAACAGGGAGTTGAGAAATGCAGATTGGAGTCTTGACAGACCTCTTGCTACTTTACCTCCTGTCTCCCAGTATGCTTCTTCAGAGAAGGTTTGGCCAGAAGAACGTCTTCGAGACATGTCCATGGCAGCAATCAAAGAATACTACAGTGCTAGAGATGAGAAGGAAGTTGCTTTATGTGTCAAAGATTTAAACTCTCCAAGCTTTCATCCTTCGATGATTTCTCTATGGGTCACTGACTCCTTTGAGAGAAAGGACACGGAAAGAGATCTTTTGGCTAAGTTGTTAGTCAACCTTGCCAAGTCTCAGGATGTCACCTTGAGCCAGACTCAGCTTGTTGAAGGGTTTGAATCTGTTCTAAGTACTTTGGAGGATGCTGTTAATGATGCCCCCAGAGCAGCAGAATTTCTTGGCCGGATTTTTGCAAGAGTTGTAACAGAGAATGTTGTCTCCTTGAAAGAGATTGGGCGACTAATACATGAAGGCGGAGAGGAGCCAGGCCAGCTCTTAGAGATCGGACTTGCAGCTGATGTTCTGGGATGCACATTGGAGGTAATAAAAGTTGAGAAGGGAGATACTGTTCTAAACGAGATACTTACAAGCTCGAGTTTGCGGCTGGAGACTTTCCGGCCGCCGAATCCCATTACATCGAGAAAgttagaaaaatttatttag 5457 0.4387 MSFNQSRSDKSETLYRKSGRSGGNFNQQQRGSGGTYVKGGGGGPAPSPSINSGSTQPSNRRANNAHGGQSKVNPSTVNSAESHSASTGGMIPNGAHLQQLPGASDAPATNATAKSTEASSAHKSTRVAPKAPTPRPPAMNSDPAAPTTPAKGDPSKQFAFQFGSISPGFMNGISIPARTSSAPPNLDEQKRDQARHDSLRPVPSVPTPPKQLPAARKDSGVADQSNAGETHSVNKAKKDAQLPVLPPASQVQKPSVPLTGISMAMPYHHQSQASVQFGGPSPQIQSQGMPAASLQMPIPMPLPMGNAAQVQQQVFVPGLQPLPIHPQGIMHQGQNMSFTPQMGPQLPHQLGSMGININPQYPQQQGGKFATPRKTTTVKITHPETHEELRLDFDKKADSYSDGVSSGARSYSNVTSQNQPVQSFAPSHPINYYPSSSYSNSSLFFPPSSVPLSSSHITPNSQQPRFNYPVNHGPQNVSFNNQINLGSLPVNKTGTSIPGNVEAPNLEHSRDVHKVIPPATSGVTSVNIKPIGGSGIVDSSLSSASITGASGDASSSVPQKGSETCSEISSQQSKSPRDSSVSSPLPKQPASGSSEKLSSTPSMPTSVAVSENSASVVSNNEGRRKESLSRSNSLKDNQKKMGKRGQSQHQVPVQSPTVANVPSQTVDSVMPDHGVSETSETKRNDCAAITSEDIPATPSTTASGGSVPNAVEIKTDCSAEGSVHVSDEGAGALAVDNLNNHKHDKLEDSSLQNKLSKLNIQEMGDKNDRSSEVFKQNVNENGTDCKQTEQEATKVTTEFRTSKTVQQRQESQNESTNYRSESVTKADDLDISLNRNDSTVSNDSIANSAASDKNSGDLPEVTSKHSKEGADNADSGLASLPVSGNKDRPISEQNKVKTTSKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKEVVSTESTESTSGSLTQLTQDAAQPDAIASEKNGQNKVEPDDWEDAADMSTPKLEVADKSPQDSDGSGLTAKKYSRDFLLKFAEQCIDLPEGFEIPADIAEALMNANIGGSHVERDSHPSPGRIIDRPGGMSRMDRRGGGQFEEDRWSKVPGPFNSGRDMRIDGFGGNPGFRPVQGGNFGVLRNPRAQTPLQYAGGILSGPMQSMGNQGGMQRNSPDGERWQRTYQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFEKALMEPTFCEMYANFCLHLAAELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKQSDEEREEKRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMSLSSRVRFMLRDAIDLRKNKWQQKRKVEGPKKIEEVHRDAAQERQAQTGRLSRGPGNNPSARRMPMEFSPRGSSMLSSPNTPMGLRGLPTQVRGGGSQDVRQDDRHSYDARNLSVPLPQRPLGDDSITLGPQGGLARGMSFRGPDSRRMATGLNGFSNSSERVMYSSREDLTPRYATDRFSGPTGYDQSGVQERNMNYGNRELRNADWSLDRPLATLPPVSQYASSEKVWPEERLRDMSMAAIKEYYSARDEKEVALCVKDLNSPSFHPSMISLWVTDSFERKDTERDLLAKLLVNLAKSQDVTLSQTQLVEGFESVLSTLEDAVNDAPRAAEFLGRIFARVVTENVVSLKEIGRLIHEGGEEPGQLLEIGLAADVLGCTLEVIKVEKGDTVLNEILTSSSLRLETFRPPNPITSRKLEKFI 1818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1896 1818 SUPERFAMILY ARM repeat 1626 1815 IPR016024 -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 778 820 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 103 123 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 544 709 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 1416 1440 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 833 857 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 778 978 - -
Sto1g1896 1818 Gene3D - 1194 1429 - -
Sto1g1896 1818 Pfam MA3 domain 1635 1743 IPR003891 -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 17 34 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 544 622 - -
Sto1g1896 1818 Gene3D - 1624 1818 - -
Sto1g1896 1818 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 78 1808 - -
Sto1g1896 1818 SMART ma3_7 1631 1745 IPR003891 -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 1062 1077 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 939 964 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 1 253 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 1416 1531 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 644 685 - -
Sto1g1896 1818 Pfam MIF4G domain 1194 1416 IPR003890 GO:0003723|GO:0005515
Sto1g1896 1818 MobiDBLite consensus disorder prediction 1285 1312 - -
Sto1g1896 1818 Coils Coil 1276 1296 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 403 422 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 693 708 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 159 187 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 623 643 - -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 1044 1090 - -
Sto1g1896 1818 ProSiteProfiles MI domain profile. 1630 1754 IPR003891 -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 1467 1481 - -
Sto1g1896 1818 SUPERFAMILY ARM repeat 1188 1418 IPR016024 -
Sto1g1896 1818 MobiDBLite consensus disorder prediction 47 93 - -
Sto1g1896 1818 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 78 1808 IPR045208 GO:0003743
Sto1g1896 1818 SMART if4_15 1194 1416 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1896 Sto-Chr1 27329671 27339140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1896 1 1817 Eukaryotic Initiation Factors Gene Family AT3G60240 46.515 0.0 1330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1896 K03260 - gmx:100796636 2303.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1896 1 27329671 27339140 Sto1g1896 1 27329671 27339140 ECH