Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1893 ATGAAATGCTTCAACTATTTCACAAGAAGCAGAAGGCaaagatcatcatcatcatcatcatcatcagtacGAGAATCTGAGGTTAAAGAGCAATTGAAATCCCAGTGTTCATCATCAATAATCTCGCCACGTGGAATACCAGAACTGTATGAAGAGAAAGCTCATaacttgcgagtcttctccttCGCCGAGCTTCGTGACGCAACATGGGGTTTCAGTAGGCTTTTGAAGATAGGAGAAGGAGGGTTCGGGAGTGTGTATAAAGCTTCAATCCAGCCCCTTCATCATCATGGGAATAATTATAAGGAGCCTCCTATTTCTGTTGCCATTAAAACACTAAACAAGGATGGATTCCAGGGTCATAAGCAATGGTTAGCTGAAGTTCAGTTTCTTGGTGTGGTGGATCACCCAAATCTTGTCAAACTCATTGGATATTGTGCTGTGGACAATGAAAGAGGGATCCAGAGACTGCTTGTATACGAATACTTGCCGAACAAAAGCTTGgaacatcatctttttattaagGCACATGATCCTCTTCCTTGGAAAACAAGACTTGAAATAGCACTTGGAGCAGCTCAAGGGTTAGCATATCTGCATGAAGAATTAGAAGTTCAGGTGATGGGAACATATGGCTATGCTGCTCCAGATTACATCGAGACAGGCCATCTCACTACCAAGAGTGATGTATGGAGTTTTGGCGTGGTTCTCTACGAAATTCTTACCGGGAGGCGATCTCTGGACGAAAACCGGCCCAAAACAGAACAAAAACTTTTGGAGTGGGTGAAGAGACATCCTCCTGGCAGCAAAATGTTCAGCTCGATAATGGATCCGCGACTCGAAGGCCAGTATTCGGTTAGTGGAGCGCGAAACATAGCGAAACTCGCGGATATCTGCCTGAGTAAGAGCGCGAAAGAGCGGCCGACGATGAGTCAGGTGGTGGAGAGATTGAAGCAAGTAATCCAAGCTtcagaagaaggaaaagaagatgATGAGAAAAGTTTCGAGTTATGTGAGAATGATGAGTTACTTGTTCCACAAGAAAGGCCAAATCAAGTTACCCCTTCAGAGTTATGGAAAAGGAGGATGGCTCATCTTGCAAAACTTGGTGACCATGTGGAGAATTCTAATAGAAAAAGATTTATGATCTTACAGAGGACCAAATGTCCTTCATAG 1176 0.4065 MKCFNYFTRSRRQRSSSSSSSSVRESEVKEQLKSQCSSSIISPRGIPELYEEKAHNLRVFSFAELRDATWGFSRLLKIGEGGFGSVYKASIQPLHHHGNNYKEPPISVAIKTLNKDGFQGHKQWLAEVQFLGVVDHPNLVKLIGYCAVDNERGIQRLLVYEYLPNKSLEHHLFIKAHDPLPWKTRLEIALGAAQGLAYLHEELEVQVMGTYGYAAPDYIETGHLTTKSDVWSFGVVLYEILTGRRSLDENRPKTEQKLLEWVKRHPPGSKMFSSIMDPRLEGQYSVSGARNIAKLADICLSKSAKERPTMSQVVERLKQVIQASEEGKEDDEKSFELCENDELLVPQERPNQVTPSELWKRRMAHLAKLGDHVENSNRKRFMILQRTKCPS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1893 391 Pfam Protein tyrosine and serine/threonine kinase 77 202 IPR001245 GO:0004672|GO:0006468
Sto1g1893 391 ProSitePatterns Protein kinases ATP-binding region signature. 78 111 IPR017441 GO:0005524
Sto1g1893 391 Gene3D Transferase(Phosphotransferase) domain 1 205 343 - -
Sto1g1893 391 Gene3D Phosphorylase Kinase; domain 1 46 162 - -
Sto1g1893 391 Gene3D Transferase(Phosphotransferase) domain 1 164 204 - -
Sto1g1893 391 PANTHER OS07G0495150 PROTEIN 13 208 - -
Sto1g1893 391 PANTHER OS07G0495150 PROTEIN 207 376 - -
Sto1g1893 391 ProSiteProfiles Protein kinase domain profile. 72 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1893 391 SUPERFAMILY Protein kinase-like (PK-like) 54 317 IPR011009 -
Sto1g1893 391 PANTHER OS01G0588500 PROTEIN-RELATED 207 376 - -
Sto1g1893 391 PANTHER OS01G0588500 PROTEIN-RELATED 13 208 - -
Sto1g1893 391 Pfam Protein kinase domain 206 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1893 Sto-Chr1 27303548 27308329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1893 1 317 Glycoside Hydrolase AT3G07070 36.856 1.74e-65 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto1g1893 PK_Tyr_Ser-Thr 3.4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1893 - - cam:101511022 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1893 1 27303548 27308329 Sto1g1893 1 27303548 27308329 ECH