Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1810 ATGAGCCAGCGAGTTCCTACTGCTTCTGACGCCATGCCCATGTTAGACTATGAAGTTACAGAGCTCACATGGCAGAATGGGCAGTTATTAATGAACGGCATGGGTCTGCCTCGAGTTCCGGCGAAAccctccgccgccgccgccgccgtaaGCAATAATAGGTTCATCCATTCGGCCTCCCAATCCAAGTACACGTGGGAGAAGCTGCCTCGTACAAGTGGCACCTTAGAGTCCATAGTCAACCAGGCCACCACCACTCACTTCCCCCACAGCACCAAATCAATATCCGCCGCCGTAAGCGGCGGCGGAGATGATTTGGTGCCGTGGTTTGACCCACGGCAGCGCGCGGCGGCGGCGTCGAACACGATGACTATGGACGCGTTGGTGCCCTGTTCGAATCGTACGGACGCGGAGCAGAGCACGGGGGTTGTGGACTCTGTTTCCAGAGGGACCCGCACGTGCGCGAAGGTTTGCTCCGCACGTGTGGGGTCTTGCGGCGCGGCGGCGGCGCGGGACGGGGACAACGCGGCGGCGAAGGCGGCGCGTGTGCCTGTGGCTCGCGAGTGGAGAAGCGGGGAACTGAGTGTGAGTGGGAGGGACAGCCATCACGTGACAACAACGATTGACACGTGCGAGAGGGAATTGGATGTGGGTAATTACGGTTCTACCTCtatgggttcgccggaaaacaccAGCTCCGCCTGGCAGTGGACGAGAACCACCGCCGTGGCCGCCGCCGATGACCATGATTCTAGAGATGAAGGTGATGAAGAAGAGAAGTTTAGAAGAACAGTGAAATCTTCAGGGTGCAATAAACGGAGTAGAGCTGCTGCTGtacacaatcaatctgaaagaAGTGATAAAGCTTCAATATTGGATGAGGTTATAGAATATGTGAAGCAGCTGCAAGCACAAGTGCAAATGATGAGTAGAATGAGCATGCCCTCCATGATGCTCCCAATGACATTACAACAACAACTTCAAATGTCTATGATGCCTCCAATGGGcatgggtatgggtatgggtatgggcATGGGCTTGGACATCAGCTCCGTGTCTCGCCCAAACATCCCTACTATCTCTCCCATTCTCCATCCTACCCCGGCCGGCTTCATGCCTATGACTGCGCCGGCCATGTGGGATGCCTCTGGTGGCGGGGATCGACTGCAAGGAGCTTCGACAACAAGGGTAGTGCCTGACCCTTTGTCCATATTTTTAGCATGCCAGTCACAGGTGAGAAATTAA 1245 0.5133 MSQRVPTASDAMPMLDYEVTELTWQNGQLLMNGMGLPRVPAKPSAAAAAVSNNRFIHSASQSKYTWEKLPRTSGTLESIVNQATTTHFPHSTKSISAAVSGGGDDLVPWFDPRQRAAAASNTMTMDALVPCSNRTDAEQSTGVVDSVSRGTRTCAKVCSARVGSCGAAAARDGDNAAAKAARVPVAREWRSGELSVSGRDSHHVTTTIDTCERELDVGNYGSTSMGSPENTSSAWQWTRTTAVAAADDHDSRDEGDEEEKFRRTVKSSGCNKRSRAAAVHNQSERSDKASILDEVIEYVKQLQAQVQMMSRMSMPSMMLPMTLQQQLQMSMMPPMGMGMGMGMGMGLDISSVSRPNIPTISPILHPTPAGFMPMTAPAMWDASGGGDRLQGASTTRVVPDPLSIFLACQSQVRN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1810 414 MobiDBLite consensus disorder prediction 245 266 - -
Sto1g1810 414 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 280 320 IPR036638 GO:0046983
Sto1g1810 414 MobiDBLite consensus disorder prediction 243 287 - -
Sto1g1810 414 PANTHER TRANSCRIPTION FACTOR UNE10 1 410 - -
Sto1g1810 414 Gene3D - 251 329 IPR036638 GO:0046983
Sto1g1810 414 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 1 410 IPR031066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1810 Sto-Chr1 26296622 26300323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1810 4 412 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 40.724 3.24e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1810 - - ahf:112697399 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1810 1 26296622 26300323 Sto1g1810 1 26296622 26300323 ECH