Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1807 ATGATCCTCAAGGGTCTCTCATACATCCATCATGAGAACATCGTCCATTGTGATCTAAAACCAGAAAATATCCTTCtctttcctccttcttcttcgtctCAATCTCCAACTGATGAAAATTTTAACCTAAAGATTGCAGACTTTGGACTTGCAATGACAAAGGAAGAAAAAATTGTTAATGATGAAGAGATGATCATTGGTATGCCAGCATGGTGGAAACTTGAGGGTATAGAAGAGTTAATGTTTACACTTGCTATGGAAAGAAAACCACCTGAGATACCTGACGATGTGAGTGAGGAGTGTGGTGATTTCTTGAGGAAGTGTCTTGTGGTTGATCCTAGAGGGAGATGGACAACTAATATGCTTCTCAATCATCCTTTTATCATTTCGAATGATCAGGGAAATAGATCTTCAGAAGAGATGTTCTCTAAACTTTTGTAG 441 0.3605 MILKGLSYIHHENIVHCDLKPENILLFPPSSSSQSPTDENFNLKIADFGLAMTKEEKIVNDEEMIIGMPAWWKLEGIEELMFTLAMERKPPEIPDDVSEECGDFLRKCLVVDPRGRWTTNMLLNHPFIISNDQGNRSSEEMFSKLL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1807 146 SMART serkin_6 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1807 146 Pfam Protein kinase domain 2 56 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1807 146 ProSiteProfiles Protein kinase domain profile. 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1807 146 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 63 136 - -
Sto1g1807 146 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 57 - -
Sto1g1807 146 ProSitePatterns Serine/Threonine protein kinases active-site signature. 14 26 IPR008271 GO:0004672|GO:0006468
Sto1g1807 146 Gene3D Transferase(Phosphotransferase) domain 1 1 66 - -
Sto1g1807 146 SUPERFAMILY Protein kinase-like (PK-like) 2 133 IPR011009 -
Sto1g1807 146 Gene3D Transferase(Phosphotransferase) domain 1 67 139 - -
Sto1g1807 146 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 63 136 - -
Sto1g1807 146 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1807 Sto-Chr1 26261629 26262186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1807 2 128 MAP Kinase Kinase Kinase AT5G67080 34.756 3.98e-21 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sto1g1807 Pkinase 1.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1807 - - gmx:102660670 111.694