Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1806 ATGAGAGGAGCAGCTGTGGCGAACGACGGATCGTGGCAAGCGACGCCTGAAGCAGCGACGACGGTGACAATGCATGGAGTAGGAAGTATTGGCACAGTGTTCAAAGGAGTTCCAGTAGCAATCCAAAGAGGAAATACAGGAGTTAGAGCCATCaaaaattcattatttatttccCAATTAGTTCGCGaggaatttattttaaaatcattcaaGGGTTGCCCACACATACTTCAATGTTATGATGGCCAATACTCCgaagaaaatggaaaaataacatataatttaattatggaaTTCGCTCCTCACGGCACTCTCGAAACCCTAATCAATATCAACAACCCTCTGCCAGAAATCCTAGTAAGAACCTACACTCGTATGATACTCAAGGGTCTCTCATACATCCATCATGAGGACATAGTCCATTGTGACCTAAAACCAGAAAATATCCTTCtctttcctccttcttcttcgtctCAATCTCCAAGTTGTGAAAATTTTAACCTAAAGATTGCAGACTTTGGACTCGCAATGACGAAGGAagagaaaattattaatgatgAAGGTTGTTGTTTTCCGAAGTTTCGATTTAGAGGGACACCATATTATATGTCTCCTGAATCGGTTAGGGGTGTGATTGATACTGCTTTAGATGTATGGTCACTAGGGTGTTTGGTGATAGAGATGATCATTGGTATGCCAGCATGGTGGAAACTTGAGACTATAGAAGAGGTAATGTTTACACTTGCTATGGAAAGAAAATCACCTGAGATACCTAACAGTGTCAGTGAAGAGTGTGGTGATTTCTTGAGGAAGTGTCTTGTGGTTGATCCTAGAGGGAGATGGACGGTTGATATGCTTCTCAATCATCCTTTTATCATTTTGAGTGATTAG 891 0.3737 MRGAAVANDGSWQATPEAATTVTMHGVGSIGTVFKGVPVAIQRGNTGVRAIKNSLFISQLVREEFILKSFKGCPHILQCYDGQYSEENGKITYNLIMEFAPHGTLETLININNPLPEILVRTYTRMILKGLSYIHHEDIVHCDLKPENILLFPPSSSSQSPSCENFNLKIADFGLAMTKEEKIINDEGCCFPKFRFRGTPYYMSPESVRGVIDTALDVWSLGCLVIEMIIGMPAWWKLETIEEVMFTLAMERKSPEIPNSVSEECGDFLRKCLVVDPRGRWTVDMLLNHPFIILSD 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1806 296 ProSiteProfiles Protein kinase domain profile. 19 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1806 296 SUPERFAMILY Protein kinase-like (PK-like) 26 292 IPR011009 -
Sto1g1806 296 SMART serkin_6 19 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1806 296 Pfam Protein kinase domain 26 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1806 296 Gene3D Transferase(Phosphotransferase) domain 1 17 295 - -
Sto1g1806 296 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 22 293 - -
Sto1g1806 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Sto1g1806 296 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 22 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1806 Sto-Chr1 26255919 26258398 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1806 33 294 MAP Kinase Kinase Kinase AT3G50310 37.363 2.33e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sto1g1806 Pkinase 4.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1806 - - gmx:102660670 261.922