Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1803 ATGGGTAACCCTAAGATACTAGGAGTAGGAAGTACTGGCACAGTGTTCAAAGGAGTTCCTGTAGCAATCCAAAGAGGAAACACAGGAGTTAGAGCCATCaaaaattcattatttatttccGCATTAGTTCGCgaagaatttattttaaaatctttCAAGGGTTGCCCACACATACTTCAATGTTATGATGGCCAATACTCcgaagaaaatgagaaaataacatataatttaattatggaGTACGCTCCTCACGGCACTCTCAGAACCTTAATTAATATCAACAACCCTCTGCCAGAAATCCTAGTAAGAACCTACACTCGTATGATACTCAAGGGTCTCTCATACATCCATCATGAGAACATCGTCCACTGTGATCTAAAACCAGAAAATATCCTTCTCTTTCCTCCTTCTTATTCGTCTCAATCTCCCAGTGGTGAAAATTTTAACCTAAAGATTGCAGACTTTGGACTTGCAATGACAGAGGAAGAAAAAATTGTTAATGATGAAGGTTGTTGTTTTCCGAAGTTTCGATTTAGAGGGACACCGTATTATATGTCTCCTGAATCGGTTAGGGGTGTGATTGACACCGCTTTGGATGTATGGTCACTTGGGTGTTTAGTAATAGAGATGATTATTGGTATGCCAGCATGGTGGAAACTTGAGGGTATAGAAGAGTTAATGTTTACACTTGCTATGGAAAGAAAACCACCTGAGATACCTGACGGCGTGAGTGAGGAGTGTGGTGATTTCTTGAGGAAGTGTCTTGTGGTTGATCCTAAAGGGAGATGGACGACTGATATGCTTCTCAATCATCCTTTTATCATTTCGAGTAATCAAGAAAATAGATCTTTTGAAGAGATGTTCTCTAAACTTTTATAG 879 0.372 MGNPKILGVGSTGTVFKGVPVAIQRGNTGVRAIKNSLFISALVREEFILKSFKGCPHILQCYDGQYSEENEKITYNLIMEYAPHGTLRTLININNPLPEILVRTYTRMILKGLSYIHHENIVHCDLKPENILLFPPSYSSQSPSGENFNLKIADFGLAMTEEEKIVNDEGCCFPKFRFRGTPYYMSPESVRGVIDTALDVWSLGCLVIEMIIGMPAWWKLEGIEELMFTLAMERKPPEIPDGVSEECGDFLRKCLVVDPKGRWTTDMLLNHPFIISSNQENRSFEEMFSKLL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1803 292 SMART serkin_6 1 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1803 292 SUPERFAMILY Protein kinase-like (PK-like) 5 279 IPR011009 -
Sto1g1803 292 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 282 - -
Sto1g1803 292 ProSiteProfiles Protein kinase domain profile. 1 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1803 292 Pfam Protein kinase domain 5 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1803 292 CDD STKc_MAPKKK 5 274 - -
Sto1g1803 292 ProSitePatterns Protein kinases ATP-binding region signature. 7 34 IPR017441 GO:0005524
Sto1g1803 292 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 282 - -
Sto1g1803 292 Gene3D Transferase(Phosphotransferase) domain 1 4 291 - -
Sto1g1803 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1803 Sto-Chr1 26238543 26240832 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1803 6 281 MAP Kinase Kinase Kinase AT5G55090 40.214 4.24e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sto1g1803 Pkinase 9.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1803 - - gmx:102664043 263.848