Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1793 ATGAAAGCAAGCACCAACGATTTCAATCAGAGTAACTTCATAGGATCCACACATTTTGGAAGATTGTTTAGAGGTAAGTTTGAAGGTAAATGTGTGACAGTGAAGACTTGGGATGAAGAATTTTTGGAAAGCATAAGTTCCAAATATAATGATGAGAATTTGATCATCAATGAGGAGGTTAAATTTTGGACAAATCCAATAACTAAAGGTCATCCCAATTTAGTGACATTAATTGGTTATTGTTGGGAGAAAGATGTTAAGTGTGTTGTTTATGACCTCAATCCTATGGATACTCTTCACAATGTATTAGTGAAAGACGAACTCAATTGGATTCAGAGAATTAATGTAATTCATGAAGTTGCAAAGCTCCTGAAATTCATTCACAGCCAGGAGAAGCAAAATATGACCTTCAACATAAGTGCTTCTCATGTATTGCTGGACAAGGAAGATTGGGGTTTCAATGTTGAAGATGGTATTGCAATGACTAAGATTGCCATGCAATGCATTGATTTTTTCCCAATGAACCGTCCTACAATGAAGGAAGTATTGCAAGATTTAGAGAATCTTGTAGCTTTACAACGTTTGAGTGATACTAGACCaacaaaaagggaaaagaaCTATGTATCATTGTGA 633 0.3444 MKASTNDFNQSNFIGSTHFGRLFRGKFEGKCVTVKTWDEEFLESISSKYNDENLIINEEVKFWTNPITKGHPNLVTLIGYCWEKDVKCVVYDLNPMDTLHNVLVKDELNWIQRINVIHEVAKLLKFIHSQEKQNMTFNISASHVLLDKEDWGFNVEDGIAMTKIAMQCIDFFPMNRPTMKEVLQDLENLVALQRLSDTRPTKREKNYVSL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1793 210 ProSiteProfiles Protein kinase domain profile. 8 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1793 210 PANTHER RECEPTOR-LIKE KINASE 153 195 - -
Sto1g1793 210 PANTHER RECEPTOR-LIKE KINASE 1 149 - -
Sto1g1793 210 SUPERFAMILY Protein kinase-like (PK-like) 4 149 IPR011009 -
Sto1g1793 210 Pfam Protein tyrosine and serine/threonine kinase 11 148 IPR001245 GO:0004672|GO:0006468
Sto1g1793 210 Gene3D Transferase(Phosphotransferase) domain 1 1 198 - -
Sto1g1793 210 PANTHER OS01G0588500 PROTEIN-RELATED 1 149 - -
Sto1g1793 210 PANTHER OS01G0588500 PROTEIN-RELATED 153 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1793 Sto-Chr1 26131202 26134853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1793 1 149 Receptor kinase-like Gene Family AT4G11530 28.387 1.07e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sto1g1793 PK_Tyr_Ser-Thr 1.5e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1793 - - gmx:102662076 228.024