Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1773 ATGAAGGTCGTGCCCATAGCGTTTGAGGGATTTAGAGAGAagggggttttggattttggttcTACGGTTTCAGATTCGTTCTCGCCGGAGCAGAAGAAGTGGAATAATAGCATCAATAATACTCCTCACATAGAGCATTGCTATGTGGGCACTGAGCCCACTTCTGTTTTGGACATCAGAAGAAACCCAAGCCCTCCGACTTCTTCATCCACACTGTCTTCCTCTCACGGCGGCGGTTCCACCGATAGCTCCACCGGCGCTGCAGCGGAGCCGGCGAAGAAGCTCTCCAGAGAGAACAACCCTCCGCCTCCAGCTCCGTCGGACTTAGTGCCGGCGGTGGAAAGATGCGGGATGGTGGGAATGGAGGATTGGGAGAGCGTCTTGTCTGATTCGTCGCCTGGTCAAGATCAGTCCATCCTCAGGTTGATTATGGGTGACATTGAAGATCCTTCCGTGGGATTGAGCAAGCTCTTGCAGAGTGGAAATGGTACTACTCcgcatcaccatcatcatcaagaAGGTGATGTGGATTTCAATGGCGGTTTCGGAGTTGTGGTGGATCAGAGCTCTGTGCTGGACCCTATTTCCAGTTCTAATTTCACCATTGACCCTCCTCCACCTCCGAATTGTTCCGATTTCGCTTTCTTCAACACCAACATTTCAAGAGTTGGTTCATCTCTGAATCCGCCGAACCCTATTTTCCCAAATCCTCCCCCTCCTCCGCCTCTGTTGTTTCCTCTCGACGAGAAGCCACAAATCCTGAATCCACACTTCCTCATGAACCAATCTCAGCCTCCATTTATGCAGCCGAACCCTCCTCCTTTCCTCGTGCCTTTCCCGTATCATGACCACCACCAGCTTCTTCCTCAGCCGCCGCCTCCGGCGAAACGCTTGAACTGTGGCCCCGTGGGACCAAATTTCCAAGTTCCAAAACCGCCATTCTTAGATTCCGGTGGCCACGAGCTCTTTCTTCGGCGGACGCCGCCGCCGCAGGCGGCCGCGGCGAAGCAGAGCTCCGGCGAGGAGTTGATTGGCGCTTACAAATCCTTCTCCGAAGTCTCTCCTGTACTCCAATTCTCCAATTTCACTTCCAACCAAGCATTACTCGAAGCCGTCGAAGGGTTTGATCGAATCCACATAATTGATTTCGACATTGGGTTTGGTGGACAATGGTCTTCCTTCATGCAAGAGCTAGCATTGAGAAATGGagAAATCCTCAAGCAATACGCCTCGGAAATCCGCATCCCCTTCGAGCTTGAGATTCTATCCCTCGAGTCCCTCCCTTCTCACCCTCTCCGTGATCGTCGTGACTGTGAAGAAGCCATTGCTGTGAATTTGCCTATTGCTTCCTTCTCCCATTTCCCTTCGTATCTCCCTCTGGTTCTTCGCTTCGTGAAGCAGCTCGCTCCGAAGATTGTCGTCACTGTGGATAAACCTTGTGATCGTACGGATGCGTCGTTCGCTCAGCATCTAATTTACGCAATCCAGGCTTACTCTGTCCTCCTCGAGTCCCTCGATGCTGTCGGTGTGAATCTAGACATTGTTCAAATGATCGAGAAGTATCTTGTTCAGCCAGCCATGGAGAAAATTGTGTTGGGTCGTCACAATAGATTGCAGGAAAGAACACCCCCATGGAAGAACCTGCTTCTCTCATCTGGGTTTTCGCCATTGACACTAAGCAACTTCACGGAGTCTCAAGCAGAGTGTTTGGTGCAGAGGAATCCAGGGAGGGGATTCCATGTGGAGAAGAAGCAGTCCTCTTCTTCTCTTGTTCTGTGTTGGCAGAGGAAGGAACTAATCTCAGTTTCAACATGGGGATGTTGA 1824 0.5 MKVVPIAFEGFREKGVLDFGSTVSDSFSPEQKKWNNSINNTPHIEHCYVGTEPTSVLDIRRNPSPPTSSSTLSSSHGGGSTDSSTGAAAEPAKKLSRENNPPPPAPSDLVPAVERCGMVGMEDWESVLSDSSPGQDQSILRLIMGDIEDPSVGLSKLLQSGNGTTPHHHHHQEGDVDFNGGFGVVVDQSSVLDPISSSNFTIDPPPPPNCSDFAFFNTNISRVGSSLNPPNPIFPNPPPPPPLLFPLDEKPQILNPHFLMNQSQPPFMQPNPPPFLVPFPYHDHHQLLPQPPPPAKRLNCGPVGPNFQVPKPPFLDSGGHELFLRRTPPPQAAAAKQSSGEELIGAYKSFSEVSPVLQFSNFTSNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGEILKQYASEIRIPFELEILSLESLPSHPLRDRRDCEEAIAVNLPIASFSHFPSYLPLVLRFVKQLAPKIVVTVDKPCDRTDASFAQHLIYAIQAYSVLLESLDAVGVNLDIVQMIEKYLVQPAMEKIVLGRHNRLQERTPPWKNLLLSSGFSPLTLSNFTESQAECLVQRNPGRGFHVEKKQSSSSLVLCWQRKELISVSTWGC 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1773 607 Pfam GRAS domain family 334 403 IPR005202 -
Sto1g1773 607 Pfam GRAS domain family 404 605 IPR005202 -
Sto1g1773 607 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 335 403 IPR005202 -
Sto1g1773 607 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 281 IPR005202 -
Sto1g1773 607 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 403 606 IPR005202 -
Sto1g1773 607 PANTHER SCARECROW-LIKE PROTEIN 6 335 403 - -
Sto1g1773 607 PANTHER SCARECROW-LIKE PROTEIN 6 403 606 - -
Sto1g1773 607 PANTHER SCARECROW-LIKE PROTEIN 6 41 281 - -
Sto1g1773 607 MobiDBLite consensus disorder prediction 21 40 - -
Sto1g1773 607 MobiDBLite consensus disorder prediction 57 87 - -
Sto1g1773 607 ProSiteProfiles GRAS family profile. 1 606 IPR005202 -
Sto1g1773 607 MobiDBLite consensus disorder prediction 56 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1773 Sto-Chr1 25924528 25926693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1773 114 607 GRAS Transcription Factor Family AT4G00150 40.399 1.36e-107 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto1g1773 GRAS 3e-38 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1773 - - thj:104817010 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1773 1 25924528 25926693 Sto1g1773 1 25924528 25926693 ECH