Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1731 ATGGTAGCTTTTGGCCTCTTCCAAATTCTCCTACTCGTTCCCTTCTTATATTTCTCTTACGTCTCTAGTTATTCTTTGAATGATATCAAATTGTGGTGCAACCAAACTCCTAATCCTCAACCATGTGAGTATTTCTTGACCAATAACCCAACTCATCAACTCAAAACCATCAAACACAAACATGACTTTTTCAAGCTTTCATTGCAACTCGCACAAGAGAGAGCATTGAAGGGCCATGCAAATACCCTCTCATTAGCTCCCAAATGTAGGAACCCAAGTGAGAAGGCTGCATGGGCTGATTGCATTGAGCTTTACGACCAAACCATTCAAAGACTCAACAAAACCATAGATCCTAACACCAACTGCTCCCAAACTGATGCTCAGACATGGCTCAGCACTGCTCTCACCAACCTCGAGACCTGCAAAGCCGGGTTCTACGATCTCGGGGTTCAAGACTATGTCTTGCCATTGATGTCCAACAATGTTACCAAGTTGCTAAGTAACACTTTGGCTCTCAACAAGGTTCCATATCAAGAACCAAGTTATAATAAAGATGGGTTCCCGACATGGGTTAGGCCTGGTGACAGGAAGTTGTTGCAGGCGTCTTCTCCGGCTTCTCGGGCTAACGTGGTGGTGGCGAAAGACGGGTCTGGCAAGTATACTACTTTGAGCGCTGCCATAAATGCTGCTCCAAAAAGTAGTAATGGGCGGTATGTGATATATGTGAAGACTGGAATTTACAATGAACAAGTTGAGATAAAGGCAAAGAATATCATGTTGGTGGGAGATGGTATTGGAAAGACTATAATCACCGGAAGCAAAAGTGTTGGAGGAGGCACCACAACCTTCCGCTCTGCCACAGTTGCTGTTGTAGGAGATGGATTTATTGCTCAAGGCATCACATTTAGAAATACTGCTGGTGCATCGAACCACCAAGCCGTAGCACTACGTTCTGGATCGGACCTATCAGTGTTTTACAAATGTAGCTTCGAAGGATACCAAGACACTTTGTACGTTCATTCGGAGAGACAATTCTACAGGGAATGTGACATTTATGGCACATTGGACTTCATCTTTGGAAATGCTGCAGTGGTTTTCCAAAATTGTAACATTTTCGCAAGAAACCCTCCCAACAAAGTGAACACAATAACTGCTCAAGGTCGGACCGATCCGAACCAAAACACTGGAATTTCCATTCACAATTGTAAGGTTACTGCAGCCTCTGATTTGAAAGCAGTTCAGAACTCTGTAAAGACATATCTTGGAAGGCCATGGCAAGAATATTCTAGAACAGTGGTGATGAAGACTTTTCTTGACAGTTTGATAAACCAAGCTGGGTGGTTGGAATGGAGTGGGAACTTTGCGTTGAATACTTTGTATTATGGAGAGTATATGAATACGGGTGCGGGTTCTTCTACGGCAAATCGGGTCAAGTGGAAAGGTTATCGTGTTATAAGCAGTGCTTCCGAAGCTTCAAAATTCACAGTTGGAAATTTCATTGCTGGAAACTCATGGCTCCCAGCTACTAGTGTGCCTTTCACCTCTGCTTTATAA 1554 0.435 MVAFGLFQILLLVPFLYFSYVSSYSLNDIKLWCNQTPNPQPCEYFLTNNPTHQLKTIKHKHDFFKLSLQLAQERALKGHANTLSLAPKCRNPSEKAAWADCIELYDQTIQRLNKTIDPNTNCSQTDAQTWLSTALTNLETCKAGFYDLGVQDYVLPLMSNNVTKLLSNTLALNKVPYQEPSYNKDGFPTWVRPGDRKLLQASSPASRANVVVAKDGSGKYTTLSAAINAAPKSSNGRYVIYVKTGIYNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIAQGITFRNTAGASNHQAVALRSGSDLSVFYKCSFEGYQDTLYVHSERQFYRECDIYGTLDFIFGNAAVVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNCKVTAASDLKAVQNSVKTYLGRPWQEYSRTVVMKTFLDSLINQAGWLEWSGNFALNTLYYGEYMNTGAGSSTANRVKWKGYRVISSASEASKFTVGNFIAGNSWLPATSVPFTSAL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1731 517 ProSitePatterns Pectinesterase signature 1. 234 253 IPR018040 -
Sto1g1731 517 SUPERFAMILY Pectin lyase-like 203 514 IPR011050 -
Sto1g1731 517 Pfam Plant invertase/pectin methylesterase inhibitor 28 172 IPR006501 GO:0004857
Sto1g1731 517 Gene3D - 204 517 IPR012334 -
Sto1g1731 517 CDD PMEI-like_3 31 174 - -
Sto1g1731 517 Pfam Pectinesterase 209 503 IPR000070 GO:0030599|GO:0042545
Sto1g1731 517 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 175 IPR035513 -
Sto1g1731 517 Gene3D Invertase/pectin methylesterase inhibitor family protein 24 175 IPR035513 -
Sto1g1731 517 ProSitePatterns Pectinesterase signature 2. 351 360 IPR033131 -
Sto1g1731 517 PANTHER PECTINESTERASE 5 516 - -
Sto1g1731 517 SMART PMEI_2 24 172 IPR006501 GO:0004857
Sto1g1731 517 PANTHER PECTINESTERASE 5 516 - -
Sto1g1731 517 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 175 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1731 Sto-Chr1 25381089 25382732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1731 1 517 Carbohydrate Esterase AT2G45220 67.375 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1731 K01051 - gmx:100783964 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1731 1 25381089 25382732 Sto1g1731 1 25381089 25382732 ECH