Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1716 ATGATCTTGGGAACTATGATAGATGCAGTCATACCCAGAGAATTAGCGAATCTAAAGAATTTGGTCACCTTGAACTTGAGTTCCAACAATATTTCTGGTAGCATACCGCCAGAAATTGGACGACTTGTTCTTCTAGAAACTCTAGACCTGTCGCGGAATAGGCTGACAGGTAACATACCTGATCAAGTGGGCTTCTTACCAAAATACACTCAATTGGATTTGAGCTATAATAATCTCATTGGTAACATACCTAAACAACTTGGTATGCTCAAACTCATCAACTTGTCATACAACTCCCTTAGTGGGTATGTCCCAATGGAAATTTATTGCTCATTTCCTCACAACATATTGCAAGACATCATTGGAGTTACAGAAGACTTTGATATCAAGTACTGTATTGGAACTGGTGCTTATGGAAGTGTCTATAAGGCATCACTTCCTAGTGGTCGAATTGTTGCATTGAAAAAGCTTCATAGGACTGAATCTCAAGATCCATCATTTTCCAAGAGCTTCCACAACGAGGTCAAGATGTTGACTGAAATCCGACATCGCAACATCGTGAAACTTCATGGTTTTTGTTTGCACAACAGATGCATGTTTCTCATTTATGAGTACATGGAAAGGGGAAGCCTTTTTTATGTCTTGAGGAATGATGTTGAAGCTGATGAATTGAATTGGAGCAAGAGGGTGAACGCCATTAAAGGAATAGCCAATGCCTTGTCTTACATGCATGATTGTAAGCCATCAATAATTCATCGAGACATAACAAGTAGCAACATATTGTTGAACTCAAGCATGGAAGCATTTGTCTCAGACTTTGGCACAGCTCGAATCCTTGATCCAGATTCATCCAATCAAACTCTTCTAGTTGAACTTGCATACACAATGGTGGTGACTGAAAAATGTGATGTTTATAGTTTCGGTGTGGTAACATTAGAAACAATCATGGGAAGACATCCAGGAGAGTTGATCTCTTCTTTGTCAAAGACTAATACTACTCAAAGCATAATGCTTAAAGATGTGTTAGACTCACGTCTCCCACTTCCTTTGAAGAAAGATGCTCAAGATGTTGTTCTTTTGGTCACAATAGCACTATCATGCTTGAGTTCCACACCAAAATCTCGACCATCAATGCAGCAAGTGGCACAACAACTTTCAGTTTCCAAACAACCTTTTCATGTTTGTTTTGAAGAAATTTCACTACAGCAATTGATGAATTAA 1221 0.3874 MILGTMIDAVIPRELANLKNLVTLNLSSNNISGSIPPEIGRLVLLETLDLSRNRLTGNIPDQVGFLPKYTQLDLSYNNLIGNIPKQLGMLKLINLSYNSLSGYVPMEIYCSFPHNILQDIIGVTEDFDIKYCIGTGAYGSVYKASLPSGRIVALKKLHRTESQDPSFSKSFHNEVKMLTEIRHRNIVKLHGFCLHNRCMFLIYEYMERGSLFYVLRNDVEADELNWSKRVNAIKGIANALSYMHDCKPSIIHRDITSSNILLNSSMEAFVSDFGTARILDPDSSNQTLLVELAYTMVVTEKCDVYSFGVVTLETIMGRHPGELISSLSKTNTTQSIMLKDVLDSRLPLPLKKDAQDVVLLVTIALSCLSSTPKSRPSMQQVAQQLSVSKQPFHVCFEEISLQQLMN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1716 406 ProSiteProfiles Protein kinase domain profile. 127 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1716 406 SUPERFAMILY Protein kinase-like (PK-like) 101 386 IPR011009 -
Sto1g1716 406 PRINTS Leucine-rich repeat signature 45 58 - -
Sto1g1716 406 PRINTS Leucine-rich repeat signature 66 79 - -
Sto1g1716 406 Gene3D Transferase(Phosphotransferase) domain 1 206 397 - -
Sto1g1716 406 Gene3D Ribonuclease Inhibitor 4 111 IPR032675 -
Sto1g1716 406 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Sto1g1716 406 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 9 108 - -
Sto1g1716 406 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 118 404 - -
Sto1g1716 406 SUPERFAMILY L domain-like 10 114 - -
Sto1g1716 406 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 108 - -
Sto1g1716 406 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 118 404 - -
Sto1g1716 406 Gene3D Phosphorylase Kinase; domain 1 112 205 - -
Sto1g1716 406 Pfam Protein kinase domain 131 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1716 406 ProSitePatterns Tyrosine protein kinases specific active-site signature. 250 262 IPR008266 GO:0004672|GO:0006468
Sto1g1716 406 ProSiteProfiles Leucine-rich repeat profile. 20 42 IPR001611 GO:0005515
Sto1g1716 406 Pfam Leucine rich repeat 20 79 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1716 Sto-Chr1 25211370 25213245 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1716 7 84 Receptor kinase-like Gene Family AT4G08850 42.308 1.54e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g1716 Pkinase 1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1716 - - ahf:112795089 438.728