Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1715 ATGGAAAGGGGAAGCCTTTTTTATGTCTTGAGGAATGATGCTGAAGCTGATGAATTGAATTGGAGCAAGAGAGTGAATGCCATTAAAGGAATAGCCAATGCCTTGTCTTACATGCATGATTGTAAGCCATCAATAATTCATCGAGACATAACAAGTAGCAACATATTGTTGAACTCAAGCATGGAAGCTTTTGTCTCAGACTTTGGCACAGCTCGAATCCTTGATCCAGATTCATCCAATCAAACTCTTCTAGTTGGTACATATGGTTATGTTGCCCCAGAACTTGCATACACAATGGTGGTGACTGAAAAATGTGATGTTTATAGTTTCGGTGTGGTAACATTAGAAACAATCATGGGAAGACATCCAGGAGAGTTGATCTTTTCTTTGTCAAAGACTAATTCTACTCAAAGCATAATTCTTAAAGATGTCTTAGACTCACGTCTCCCACTTCCTTTGAAGAAAGATGCTCAAGATGTTGTTCTTTTGGTCACAATAGCACTATCATGCTTGAGTTCCACACCAAAATCTCGACCATCAATGCAGCAAGTGGCACAACAACTTTCAGTTTCCAAACAACCTTTTCATGTTTGTTTTGAAGAAATTTCACTACAGCAATTGATGAATCGAGATATGTTTGTTGTAGGAAGAAATTAG 657 0.3805 MERGSLFYVLRNDAEADELNWSKRVNAIKGIANALSYMHDCKPSIIHRDITSSNILLNSSMEAFVSDFGTARILDPDSSNQTLLVGTYGYVAPELAYTMVVTEKCDVYSFGVVTLETIMGRHPGELIFSLSKTNSTQSIILKDVLDSRLPLPLKKDAQDVVLLVTIALSCLSSTPKSRPSMQQVAQQLSVSKQPFHVCFEEISLQQLMNRDMFVVGRN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1715 218 Gene3D Transferase(Phosphotransferase) domain 1 1 203 - -
Sto1g1715 218 ProSitePatterns Tyrosine protein kinases specific active-site signature. 45 57 IPR008266 GO:0004672|GO:0006468
Sto1g1715 218 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 214 - -
Sto1g1715 218 Pfam Protein kinase domain 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1715 218 ProSiteProfiles Protein kinase domain profile. 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1715 218 SUPERFAMILY Protein kinase-like (PK-like) 1 189 IPR011009 -
Sto1g1715 218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1715 Sto-Chr1 25195450 25196512 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1715 4 188 Receptor kinase-like Gene Family AT2G35620 42.000 6.31e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g1715 Pkinase 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1715 - - gmx:100789677 305.449