Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1714 ATGATAGATGCAGTCATACCCAGAGAATTAGCGAATCTAAAGAATTTGGTCACCTTGAACTTGAGTTCCAACAATATTTCTGGTAGCATACCGCCAGAAATTGGACGACTTGTTCTTCTAGAAACTCTAGACCTCTCGCGGAACAGGCTGACAGCTTGGTATGCTCAAACATATCAACTTGTCATACACTCCCTCAGTGGGTATGTCCCAAAGGAAATTTATTGCTCATTTCCTCACAACATATTGCAAGGTAATAAGGAACAACTTGGTCTACAAAAGGATCTTTCTTGTTCTAACCATTCCACTACTCCTTCTCTTGCTGACAAGCCGAAGCGTTACTTAAGGATCATCCTTCCTTTGACAATTTTCCTTGGCTTCCTTTTTATTGGAGCATTGATATTTACTCGATATCTGCACAAGAAGAAAAAGCCAGAGACAATAGTACAAAGAAATGGAGACATATTCTCAGTTTGGAATTATGATGGTAAAATCGCATTTGAAGACATCATTGAAGTTACAGAAGACTTTGATATCAAGTACTGTATTGGAACTGGTGCTTATGGAAGTGTCTATAAGGCATCACTTCCTAGTGGTCGAATTGTTGCATTGAAAAAGCTTCATAGAACTGAAGCTCAAGATCCATCATTTTCCAAGAGCTTCCACAATGAGGTCAAGATGTTGACTGAAATCCGACATCGCAACATCATAAAACTTCATGGTTTTTGTTTGCACAACAGATGCATGTTTCTCATTTATGAGTACATGGAAAGGGGAAGCCTTTTTTATGTCTTGAGGAATGATGCTGAAGCTGAAGAATTGAATTGGAGCAAGAGGGTGAATGCCATTAAAGGAATAGCAAATGCCTTGTCTTACATGCATGATTACTTTGGCACAGCTCGAATCCTAGATCCAGATTCATCCAATCAAACTCTTCTAGTTGGTACATATGGTTATGTTGCCCCAGGTAATAAGAAACTACTTGGTCTAGAAAAGGATCTTTCTTGTTCTAACCACTCCACTACTCCTTCTCCTGCTGAGAAGCTGAAGCGTTACTTAAGGATCATCCTTCCTTTGACAATTTTCCTTGACTTCCTTTTAATTGGAGCATTGATATTTACTCGATATCTGCACAAGAAAAAAACGCCAGAGACAATAGTACAAAGAAATGGAGACATATTCTCAGTTTGGAATTATGATGGTAAAATCGCATTTGAAGACATCATTGGAGTTACAGAAGACTTTGATATCAAGTACTGTATTGGAATTTGGCTTTATGGAAGTGTCTATAAGGCATCACTTCCTAGTGGTCGAATTGTTGCATTGAAAAAGCTTCATAGGACTGAATCTCAAGATCCCATTTTCCAAGAGCTTCCACAATGA 1380 0.3855 MIDAVIPRELANLKNLVTLNLSSNNISGSIPPEIGRLVLLETLDLSRNRLTAWYAQTYQLVIHSLSGYVPKEIYCSFPHNILQGNKEQLGLQKDLSCSNHSTTPSLADKPKRYLRIILPLTIFLGFLFIGALIFTRYLHKKKKPETIVQRNGDIFSVWNYDGKIAFEDIIEVTEDFDIKYCIGTGAYGSVYKASLPSGRIVALKKLHRTEAQDPSFSKSFHNEVKMLTEIRHRNIIKLHGFCLHNRCMFLIYEYMERGSLFYVLRNDAEAEELNWSKRVNAIKGIANALSYMHDYFGTARILDPDSSNQTLLVGTYGYVAPGNKKLLGLEKDLSCSNHSTTPSPAEKLKRYLRIILPLTIFLDFLLIGALIFTRYLHKKKTPETIVQRNGDIFSVWNYDGKIAFEDIIGVTEDFDIKYCIGIWLYGSVYKASLPSGRIVALKKLHRTESQDPIFQELPQ 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1714 459 ProSiteProfiles Protein kinase domain profile. 176 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1714 459 ProSitePatterns Protein kinases ATP-binding region signature. 182 204 IPR017441 GO:0005524
Sto1g1714 459 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 351 455 - -
Sto1g1714 459 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 2 321 - -
Sto1g1714 459 ProSiteProfiles Leucine-rich repeat profile. 15 37 IPR001611 GO:0005515
Sto1g1714 459 Pfam Protein kinase domain 180 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1714 459 SUPERFAMILY L domain-like 5 55 - -
Sto1g1714 459 Pfam Leucine rich repeat 11 50 IPR001611 GO:0005515
Sto1g1714 459 SUPERFAMILY Protein kinase-like (PK-like) 166 321 IPR011009 -
Sto1g1714 459 Gene3D Transferase(Phosphotransferase) domain 1 255 325 - -
Sto1g1714 459 Gene3D Phosphorylase Kinase; domain 1 376 457 - -
Sto1g1714 459 Gene3D Phosphorylase Kinase; domain 1 138 254 - -
Sto1g1714 459 Gene3D Ribonuclease Inhibitor 1 100 IPR032675 -
Sto1g1714 459 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 351 455 - -
Sto1g1714 459 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1714 Sto-Chr1 25189367 25195355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1714 6 83 Receptor kinase-like Gene Family AT4G08850 34.483 5.02e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g1714 Pkinase 3.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1714 - - qsu:112024920 318.161