Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1713 ATGCCTTCTTCTTTCCTCCTATTGTTTCTAGTGTTGCTGCTTTTACTACCACAATCCCAACATCTTCCTCTTCATCATACACATGAAGCAAATGCTTTGCTTTCAAGTCATTGGTGGAATGACAAAAACATCTCAAACCGTTGCAATTGGCTCGGTATTGTTTGCAATGAGGTTGGAAGCATTATTGAGATTTCAAATCCACTAAACAAGTCTCAACCAGGATTATGCTCATCTTGGTATATTAATATCACTGCCTTCACAAACTTAGTTCGTTTGGATCTCAGTGAAATGCAGTTGTGGGGTGAGATACCTACTACCATTGTGAACCTCACTCAACTTGTTGTATTTGATATTTCCTGCAATTCCATAAACGGTGAAGTTCCACATGAACTAAGCACTTTGAAGAAACTTGTCACCATTAACTTGAGTGGTAACAATTTTAGTGGATCCATTCCTTCAAGCTTTGGTCATATGAGCAGTCTCACTCATTTGAACCTATCCTCCAATCAGCTTACTGGTGAGCTTCCTATGACACTTGCAAATCTCACCCAACTTGTGGTCCTTGATATTTCTTCAAACTCTATCAGAGGTGCAATTCCTCTTGATTTTGACAATTTGAAGAACCTTGTTGCTTTAGATTTAAGTGACAACAAGTTAAATGGATCTATACCTTCAAGTTTGGGTCTTATGAGCAATCTCTTGCATTTGTTTCTGCATAAGAATTCAATCTCTGGTAAGATTCCTTCTTCCATTGGAAATCTCACCCAGCTAGTGAATTTGAAGCTTTCCCATAATAAAATCAGTGGTTGCATCCCTCCAGAAATAGGAAGGTTAACGAGTTTATTAACCTTAGATATTGGTTACAACAATATGCTTGTTAGTGCAAACATTCCTTTGGAGATAGGGAACTTGAAGAATTTGACTTACTTAAGCTTGAGTGGGAATAGGTTAAGTGGTCAAATTCCGAGCACTATAGGATACTTGAAGAGTTTGAGGGTTCTCCTTCTTGATTCAAACAATATTAATGGTTCAATACCTTCAGAAATATGGGATTTGAGAAGTTTAACTGTGCTAAACCTTTCACATAACTCTCAAAGTGGCTCAGTCTCCTCAAATATAGCACTTTTAGTTCATTTGCAACATCTTTCAATAAGTTCTAATCAAATTGAAGGTTGTATTCCCATTGCAATTGAGCATTTGATTGATCTAAAAGTTCTCGATCTTTCTAGTAATAAGATATCTGGTGTTATACCCTTTGGGATTGGAGAGTTGACTGGACTTCAATTTTTAGACCTTTCCTACAATAATTTAGAGGGTCCTATCCCACCTGGTATTCAAGTTCATTCCAATTACCTTAAATTGAGCAACAACTTCCTCAATGGAACCATTATGTTTAATATTGGCAATCTTTCCTACCTAGATCTTAGTTACAACAATCTCACAGGAGAAATACCTGAGGTACCAAGTTACTCTTGCTATTCAGATAAACCACCACATAATGTAGTTGGGTACCTCACCAAAATCCTTCTTCCCATGTTTGTCCTCTTTATATTTTGCTTCTTCGCATTCTTATATGTTGGAGATTTTGTCATTTCGTTATGTCTAGCCAAGATCAAAtttaaggaaagaaagagaaagaatggGGATCTCTTTTCAATTTGGAACTACGATGGTAAAATTGCATTTGAAGATATCAAAAAAGCCACAGAggattttgatttaaaatattGCATTGGGACAGGTTCGTATGGTAGTGTTTACAGAGCACAACTTCCAAGTGGTAAGGTTGTTGCGTTGAAGAAACTACATAAAATAGAATGCGAAGATCCAACTTTCGACAAGAGTTTTCGCAATGAGATCAAGATGTTGGCAGAAATCCGCCATCGAAATATCATCAAGCTGTATGGATTCTGTTTGTACAACAAGTGCATGTTTTTGGTTTATGAGTATATGGAAGGAGGAAGCCTATTTTGTGCCTTGCATAATGATACAAGAGTTCCAGAATTAAATTGGAGTGATAGGGTCAAAATAGTTAAAGGGATAGCTAATGCTTTGGCATACATGCATCATGATTGCATCCAACCAATCATTCACCGGGATATCACTAGTGGAAATATTTTGTTGAACTCAAAGTTTGAAGCTTTTGTGGCAGACTTTGGCACTGCTAGAATCATCAATCCTAATTCCTCTCATCAAACTCTGCTAGCTAGAACATATGGATATATTGCCCCAGAACTAGCTTACACCTTAAACGCAACAGCAAAATGTGACGTTTATAGTTTTGGAGTAGTGGCATTAGAAACAATGATGGGTAAACATCCTAGAGAGTTGATTTCGTCCTTATCAAAGTCATCATCAACTCGAAGATCGATATTGAAAGATATCTTAGACTCACGTTTGCCTTTTCCTTTCTTCCGGAAAGATGCTCAAGATGTTATGCTTATTTTAACATTAGCATTAGCTTGTGTGCATTCCAAGCCAAGGTACCGACCTTCCATGCAAGAAGTGGTTAATGAATTTGAAGCTTCTCGATTACCATTTCCTTTGTCCTTTTATGATATCTCAATTGATCAATTAATGGATCAAAAGATTTATCTTACAAACCAGAAATAA 2613 0.3639 MPSSFLLLFLVLLLLLPQSQHLPLHHTHEANALLSSHWWNDKNISNRCNWLGIVCNEVGSIIEISNPLNKSQPGLCSSWYINITAFTNLVRLDLSEMQLWGEIPTTIVNLTQLVVFDISCNSINGEVPHELSTLKKLVTINLSGNNFSGSIPSSFGHMSSLTHLNLSSNQLTGELPMTLANLTQLVVLDISSNSIRGAIPLDFDNLKNLVALDLSDNKLNGSIPSSLGLMSNLLHLFLHKNSISGKIPSSIGNLTQLVNLKLSHNKISGCIPPEIGRLTSLLTLDIGYNNMLVSANIPLEIGNLKNLTYLSLSGNRLSGQIPSTIGYLKSLRVLLLDSNNINGSIPSEIWDLRSLTVLNLSHNSQSGSVSSNIALLVHLQHLSISSNQIEGCIPIAIEHLIDLKVLDLSSNKISGVIPFGIGELTGLQFLDLSYNNLEGPIPPGIQVHSNYLKLSNNFLNGTIMFNIGNLSYLDLSYNNLTGEIPEVPSYSCYSDKPPHNVVGYLTKILLPMFVLFIFCFFAFLYVGDFVISLCLAKIKFKERKRKNGDLFSIWNYDGKIAFEDIKKATEDFDLKYCIGTGSYGSVYRAQLPSGKVVALKKLHKIECEDPTFDKSFRNEIKMLAEIRHRNIIKLYGFCLYNKCMFLVYEYMEGGSLFCALHNDTRVPELNWSDRVKIVKGIANALAYMHHDCIQPIIHRDITSGNILLNSKFEAFVADFGTARIINPNSSHQTLLARTYGYIAPELAYTLNATAKCDVYSFGVVALETMMGKHPRELISSLSKSSSTRRSILKDILDSRLPFPFFRKDAQDVMLILTLALACVHSKPRYRPSMQEVVNEFEASRLPFPLSFYDISIDQLMDQKIYLTNQK 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1713 870 Pfam Leucine Rich repeat 469 483 IPR001611 GO:0005515
Sto1g1713 870 Pfam Leucine rich repeat 208 267 IPR001611 GO:0005515
Sto1g1713 870 Pfam Leucine rich repeat 306 363 IPR001611 GO:0005515
Sto1g1713 870 Pfam Leucine rich repeat 145 195 IPR001611 GO:0005515
Sto1g1713 870 Pfam Leucine rich repeat 378 437 IPR001611 GO:0005515
Sto1g1713 870 SMART LRR_typ_2 134 157 IPR003591 -
Sto1g1713 870 SMART LRR_typ_2 158 181 IPR003591 -
Sto1g1713 870 SMART LRR_typ_2 400 423 IPR003591 -
Sto1g1713 870 SMART LRR_typ_2 254 278 IPR003591 -
Sto1g1713 870 SMART LRR_typ_2 328 352 IPR003591 -
Sto1g1713 870 SMART LRR_typ_2 206 230 IPR003591 -
Sto1g1713 870 SMART LRR_typ_2 304 326 IPR003591 -
Sto1g1713 870 SMART LRR_typ_2 424 448 IPR003591 -
Sto1g1713 870 SMART LRR_typ_2 467 494 IPR003591 -
Sto1g1713 870 SMART LRR_typ_2 182 205 IPR003591 -
Sto1g1713 870 SMART LRR_typ_2 376 399 IPR003591 -
Sto1g1713 870 ProSiteProfiles Leucine-rich repeat profile. 208 230 IPR001611 GO:0005515
Sto1g1713 870 ProSiteProfiles Leucine-rich repeat profile. 160 183 IPR001611 GO:0005515
Sto1g1713 870 ProSiteProfiles Leucine-rich repeat profile. 469 491 IPR001611 GO:0005515
Sto1g1713 870 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 26 269 - -
Sto1g1713 870 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 146 300 - -
Sto1g1713 870 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 219 866 - -
Sto1g1713 870 SUPERFAMILY L domain-like 80 244 - -
Sto1g1713 870 ProSitePatterns Protein kinases ATP-binding region signature. 578 600 IPR017441 GO:0005524
Sto1g1713 870 Gene3D Ribonuclease Inhibitor 374 448 IPR032675 -
Sto1g1713 870 SMART LRR_sd22_2 110 133 - -
Sto1g1713 870 SMART LRR_sd22_2 182 203 - -
Sto1g1713 870 SMART LRR_sd22_2 304 330 - -
Sto1g1713 870 SMART LRR_sd22_2 400 418 - -
Sto1g1713 870 SMART LRR_sd22_2 206 221 - -
Sto1g1713 870 SMART LRR_sd22_2 230 256 - -
Sto1g1713 870 SMART LRR_sd22_2 376 391 - -
Sto1g1713 870 Gene3D Ribonuclease Inhibitor 22 176 IPR032675 -
Sto1g1713 870 Gene3D Ribonuclease Inhibitor 271 373 IPR032675 -
Sto1g1713 870 Gene3D Ribonuclease Inhibitor 177 270 IPR032675 -
Sto1g1713 870 SUPERFAMILY Protein kinase-like (PK-like) 554 840 IPR011009 -
Sto1g1713 870 Gene3D Transferase(Phosphotransferase) domain 1 651 845 - -
Sto1g1713 870 Gene3D Ribonuclease Inhibitor 449 492 IPR032675 -
Sto1g1713 870 Pfam Protein kinase domain 577 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1713 870 SUPERFAMILY L domain-like 201 486 - -
Sto1g1713 870 ProSitePatterns Tyrosine protein kinases specific active-site signature. 696 708 IPR008266 GO:0004672|GO:0006468
Sto1g1713 870 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 219 866 - -
Sto1g1713 870 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 146 300 - -
Sto1g1713 870 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 26 269 - -
Sto1g1713 870 Gene3D Phosphorylase Kinase; domain 1 534 650 - -
Sto1g1713 870 PRINTS Leucine-rich repeat signature 403 416 - -
Sto1g1713 870 PRINTS Leucine-rich repeat signature 424 437 - -
Sto1g1713 870 ProSiteProfiles Protein kinase domain profile. 572 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1713 Sto-Chr1 25181456 25184837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1713 64 744 Receptor kinase-like Gene Family AT4G08850 35.369 8.09e-139 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g1713 Pkinase 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1713 - - adu:107475518 748.814