Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1712 ATGTTGACTGAAATCCGACATCGCAACATCGTGAAACTTCATGGTTTTTGTTTGCACAACAGATGCATGTTTCTCATTTATGAGTACATGGAAAGGGGAAGCCTTTTTTATGTCTTGAGGAATGATGCTGAAGCTGAAGAATTGAATTGGAGCAAGAGGGTGAATGTCATTAAAGGAATAGCAAATGCCTTGTCTTACATGCATGATTGTAAGCCATCAATAATTCATCGAGACATAACAAGTAGCAACATATTGTTGAACTCAAGCATGGAAGCTTTTGTCTCAGACTTTGGCACAGCTCGAATCCTAGATCCAGATTCATCCAATCAAACTCTTCTAGTTGGTACATATGGTTATGTTGCCCCTGAACTTGCATACACATTGTTGGTGACTGAAAAATGTGATGTTTATAGTTTTGGTGTGGTAACATTAGAAACAATCATGGGAAGACATCCAGGAGAGTTGATCTCTTCTTTGTCAAAGACTAATTCTACTCAAAGCATAATTCTTAAAGATGTGTTAGACTCACGTCTCCCACTTCCTTTGAAGAAAGATGCTCAAGATGTTGTTCTTTTGGTCACAATAGCACTGTCATGCTTGAGTTCCACACCAAAATCTCGACCATCAATGCAGCAAGTGGCACAACAACTTTCAGTTTCCAAACAACCTTTTCATGTTTGTTTTGAAGAAATTTCACTACAGCAATTGATGAATCGAGATATGTTTGTTGTAGGAAGAAATTAG 744 0.379 MLTEIRHRNIVKLHGFCLHNRCMFLIYEYMERGSLFYVLRNDAEAEELNWSKRVNVIKGIANALSYMHDCKPSIIHRDITSSNILLNSSMEAFVSDFGTARILDPDSSNQTLLVGTYGYVAPELAYTLLVTEKCDVYSFGVVTLETIMGRHPGELISSLSKTNSTQSIILKDVLDSRLPLPLKKDAQDVVLLVTIALSCLSSTPKSRPSMQQVAQQLSVSKQPFHVCFEEISLQQLMNRDMFVVGRN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1712 247 Pfam Protein tyrosine and serine/threonine kinase 1 217 IPR001245 GO:0004672|GO:0006468
Sto1g1712 247 SUPERFAMILY Protein kinase-like (PK-like) 2 226 IPR011009 -
Sto1g1712 247 PIRSF ILK 1 225 - -
Sto1g1712 247 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 1 236 - -
Sto1g1712 247 Gene3D Transferase(Phosphotransferase) domain 1 34 232 - -
Sto1g1712 247 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 236 - -
Sto1g1712 247 ProSitePatterns Tyrosine protein kinases specific active-site signature. 74 86 IPR008266 GO:0004672|GO:0006468
Sto1g1712 247 Gene3D Phosphorylase Kinase; domain 1 1 33 - -
Sto1g1712 247 ProSiteProfiles Protein kinase domain profile. 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1712 Sto-Chr1 25174136 25175161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1712 2 122 Receptor kinase-like Gene Family AT4G08850 67.213 4.78e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g1712 PK_Tyr_Ser-Thr 5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1712 - - gmx:100789677 368.622