Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1710 ATGGGATTGAGAATATCCTTTCCCATTATTCTAGTTCTCTATGTCACTACTAGTAATAATGCCTTCTTCTTTCCTCCTATTGTTTCTAGTGTTGCTGCTTTTACTACCACAATCCCAACATCTTCCTCTTCATCATACACACATGAAGCAAATGCTTTGCTTTCAAGTCATTGGTGGAATGACAAAAACATCTCAAACCGTTGCAATTGGCTCGGTATTGTTTGCAATGAGGTTGGAAGCATTATTGAGATTTCAAATCCACTAAACAAGTCTCAACCAGGATTATGCTCATCTTGGTATATTAATATCACTGCCTTCACAAACTTAGTTCGTTTGGATCTCAGTGAAATGCAGTTGTGGGGTAGATTTCCTCGGGACATTACTACTCTAAAGAAGCTGAATCATCTGAATCTTTCTCATAATCATCTTTCAGGTGAGATACCTACTACCATTGTGAACCTCACTCAACTTGTTGTATTTGATATTTCCTGCAATTCCATAAACGGTGAAGTTCCACATGAACTAAGCACTTTGAAGAAACTTGTCACCATTAACTTGAGTGGTAACAATTTTAGTGGATCCATTCCTTCAAGCTTTGGTCATATGAGCAGTCTCACTCATTTGAACCTATCCTCCAATCAGCTTACTGGTGAGCTTCCTATGACACTTGCAAATCTCACCCAACTTGTGGTCCTTGATATTTCTTCAAACTCTATCAGAGGTGCAATTCCTCTTGATTTTGACAATTTGAAGAACCTTGTTGCTTTAGATTTAAGTGACAACAAGTTAAATGGATCTATACCTTCAAGTTTGGGTCTTATGAGCAATCTCTTGCATTTGTTTCTGCATAAGAATTCAATCTCTGGTAAGATTCCTTCTTCCATTGGAAATCTCACCCAGCTAGTGAATTTGAAGCTTTCCCATAATAAAATCAGTGGTTGCATCCCTCCAGAAATAGGAAGGTTAACGAGTTTATTAACCTTAGATATTGGTTACAACAATATGCTTGTTAGTGCAAACATTCCTTTGGAGATAGGGAACTTGAAGAATTTGACTTACTTAAGCTTGAGTGGGAATAGGTTAAGTGGTCAAATTCCGAGCACTATAGGATACTTGAAGAGTTTGAGGGTTCTCCTTCTTGATTCAAACAATATTAATGGTTCAATACCTTCAGAAATATGGGATTTGAGAAGTTTAACTGTGCTAAACCTTTCACATAACTCTCAAAGTGGCTCAGTCTCCTCAAATATAGCACTTTTAGTTCATTTGCAACATCTTTCAATAAGTTCTAATCAAATTGAAGGTTGTATTCCCATTGCAATTGAGCATTTGATTGATCTAAAAGTTCTCGATCTTTCTAGTAATAAGATATCTGGTGTTATACCCTTTGGGATTGGAGAGTTGACTGGACTTCAATTTTTAGACCTTTCCTACAATAATTTAGAGGGTCCTATCCCACCTGGTATTCAAGTTCATTCCAATTACCTTAAATTGAGCAACAACTTCCTCAATGGAACCATTATGTTTAATATTGGCAATCTTTCCTACCTAGATCTTAGTTACAACAATCTCACAGGAGAAATACCTGAGGTACTCTTTTCCATTCAATACGTTAACTTGTCGTTCAATTCTTTTGACATTGCAAATTTTAGCCTTTGTCATTTACGAGATGACATAGTCATTGGTAATAAGGTACCAAGTTACTCTTGCTATTCAGATAAACCACCACATAATGTAGTTGGGTACCTCACCAAAATCCTTCTTCCCATGTTTGTCCTCTTTATATTTTGCTTCTTCGCATTCTTATATGTTGGAGATTTTGTCATTTCGTTATGTCTAGCCAAGATCAAAtttaaggaaagaaagagaaagaatggGGATCTCTTTTCAATTTGGAACTACGATGGTAAAATTGCATTTGAAGATATCAAAAAAGCCACAGAggattttgatttaaaatattGCATTGGGACAGGTTCGTATGGTAGTGTTTACAGAGCACAACTTCCAAGTGGTAAGGTTGTTGCGTTGAAGAAACTACATAAAATAGAATGCGAAGATCCAACTTTCGACAAGAGTTTTCGCAATGAGATCAAGATGTTGGCAGAAATCCGCCATCGAAATATCATCAAGCTGTATGGATTCTGTTTGTACAACAAGTGCATGTTTTTGGTGAAAATAGTTAAAGGGATAGCTAATGCTTTGGCATACATGCATCATGATTGCATCCAACCAATCATTCACCGGGATATCACTAGTGGAAATATTTTGTTGAACTCAAAGTTTGAAGCTTTTGTGGCAGACTTTGGCACTGCTAGAATCATCAATCCTGATTCCTCTCATCAAACTCTGCTAGCTGGAACATATGGATATATTGCCCCAGAACTAGCTTACACCTTAAACGCAACAGCAAAATGTGACGTTTATAGTTTTGGAGTAGTGGCATTAGAAACAATGATGGGTAAACATCCTAGAGAGTTGATTTCGTCCTTATCAAAGTCATCATCAACTCGAAGATCGATATTGAAAGATATCTTAGACTCACGTTTGCCTTTTCCTTTCTTCCGGAAAGATGCTCAAGATGTTATGCTTATTTTAACATTAGCATTAGCTTGTGTGCATTCCAAGCCAAGGTACCGACCTTCCATGCAAGAAGTGGTTAATGAATTTGAAGCTTCTCGATTACCATTTCCTTTGTCCTTTTATGATATCTCAATTGATCAATTAAGGATTTAG 2736 0.3637 MGLRISFPIILVLYVTTSNNAFFFPPIVSSVAAFTTTIPTSSSSSYTHEANALLSSHWWNDKNISNRCNWLGIVCNEVGSIIEISNPLNKSQPGLCSSWYINITAFTNLVRLDLSEMQLWGRFPRDITTLKKLNHLNLSHNHLSGEIPTTIVNLTQLVVFDISCNSINGEVPHELSTLKKLVTINLSGNNFSGSIPSSFGHMSSLTHLNLSSNQLTGELPMTLANLTQLVVLDISSNSIRGAIPLDFDNLKNLVALDLSDNKLNGSIPSSLGLMSNLLHLFLHKNSISGKIPSSIGNLTQLVNLKLSHNKISGCIPPEIGRLTSLLTLDIGYNNMLVSANIPLEIGNLKNLTYLSLSGNRLSGQIPSTIGYLKSLRVLLLDSNNINGSIPSEIWDLRSLTVLNLSHNSQSGSVSSNIALLVHLQHLSISSNQIEGCIPIAIEHLIDLKVLDLSSNKISGVIPFGIGELTGLQFLDLSYNNLEGPIPPGIQVHSNYLKLSNNFLNGTIMFNIGNLSYLDLSYNNLTGEIPEVLFSIQYVNLSFNSFDIANFSLCHLRDDIVIGNKVPSYSCYSDKPPHNVVGYLTKILLPMFVLFIFCFFAFLYVGDFVISLCLAKIKFKERKRKNGDLFSIWNYDGKIAFEDIKKATEDFDLKYCIGTGSYGSVYRAQLPSGKVVALKKLHKIECEDPTFDKSFRNEIKMLAEIRHRNIIKLYGFCLYNKCMFLVKIVKGIANALAYMHHDCIQPIIHRDITSGNILLNSKFEAFVADFGTARIINPDSSHQTLLAGTYGYIAPELAYTLNATAKCDVYSFGVVALETMMGKHPRELISSLSKSSSTRRSILKDILDSRLPFPFFRKDAQDVMLILTLALACVHSKPRYRPSMQEVVNEFEASRLPFPLSFYDISIDQLRI 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1710 911 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 263 909 - -
Sto1g1710 911 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 48 417 - -
Sto1g1710 911 PRINTS Leucine-rich repeat signature 447 460 - -
Sto1g1710 911 PRINTS Leucine-rich repeat signature 468 481 - -
Sto1g1710 911 SMART LRR_sd22_2 130 156 - -
Sto1g1710 911 SMART LRR_sd22_2 250 265 - -
Sto1g1710 911 SMART LRR_sd22_2 444 462 - -
Sto1g1710 911 SMART LRR_sd22_2 348 374 - -
Sto1g1710 911 SMART LRR_sd22_2 420 435 - -
Sto1g1710 911 SMART LRR_sd22_2 226 247 - -
Sto1g1710 911 SMART LRR_sd22_2 274 300 - -
Sto1g1710 911 Gene3D Transferase(Phosphotransferase) domain 1 724 895 - -
Sto1g1710 911 Pfam Leucine Rich repeat 513 527 IPR001611 GO:0005515
Sto1g1710 911 ProSitePatterns Protein kinases ATP-binding region signature. 656 678 IPR017441 GO:0005524
Sto1g1710 911 Gene3D Ribonuclease Inhibitor 337 555 IPR032675 -
Sto1g1710 911 Gene3D Ribonuclease Inhibitor 85 336 IPR032675 -
Sto1g1710 911 SUPERFAMILY Protein kinase-like (PK-like) 632 890 IPR011009 -
Sto1g1710 911 SUPERFAMILY L domain-like 65 335 - -
Sto1g1710 911 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 48 417 - -
Sto1g1710 911 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 263 909 - -
Sto1g1710 911 SMART LRR_typ_2 130 154 IPR003591 -
Sto1g1710 911 SMART LRR_typ_2 178 201 IPR003591 -
Sto1g1710 911 SMART LRR_typ_2 348 370 IPR003591 -
Sto1g1710 911 SMART LRR_typ_2 226 249 IPR003591 -
Sto1g1710 911 SMART LRR_typ_2 444 467 IPR003591 -
Sto1g1710 911 SMART LRR_typ_2 468 492 IPR003591 -
Sto1g1710 911 SMART LRR_typ_2 298 322 IPR003591 -
Sto1g1710 911 SMART LRR_typ_2 202 225 IPR003591 -
Sto1g1710 911 SMART LRR_typ_2 372 396 IPR003591 -
Sto1g1710 911 SMART LRR_typ_2 511 535 IPR003591 -
Sto1g1710 911 SMART LRR_typ_2 250 274 IPR003591 -
Sto1g1710 911 SMART LRR_typ_2 420 443 IPR003591 -
Sto1g1710 911 ProSiteProfiles Leucine-rich repeat profile. 513 535 IPR001611 GO:0005515
Sto1g1710 911 SUPERFAMILY L domain-like 465 565 - -
Sto1g1710 911 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Sto1g1710 911 Pfam Leucine rich repeat 350 407 IPR001611 GO:0005515
Sto1g1710 911 Pfam Leucine rich repeat 181 239 IPR001611 GO:0005515
Sto1g1710 911 Pfam Leucine rich repeat 422 481 IPR001611 GO:0005515
Sto1g1710 911 ProSiteProfiles Leucine-rich repeat profile. 252 274 IPR001611 GO:0005515
Sto1g1710 911 ProSitePatterns Tyrosine protein kinases specific active-site signature. 746 758 IPR008266 GO:0004672|GO:0006468
Sto1g1710 911 ProSiteProfiles Leucine-rich repeat profile. 204 227 IPR001611 GO:0005515
Sto1g1710 911 Pfam Protein kinase domain 726 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1710 911 Pfam Protein kinase domain 655 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1710 911 Pfam Leucine Rich Repeat 132 154 IPR001611 GO:0005515
Sto1g1710 911 Gene3D Phosphorylase Kinase; domain 1 612 723 - -
Sto1g1710 911 SUPERFAMILY L domain-like 268 493 - -
Sto1g1710 911 ProSiteProfiles Protein kinase domain profile. 650 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1710 Sto-Chr1 25155697 25159116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1710 106 794 Receptor kinase-like Gene Family AT4G08850 34.586 6.06e-132 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g1710 Pkinase 2.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1710 - - aprc:113851126 736.102