Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto1g1706 | ATGCTAAATGCAAGCATACCCCACCAAATATGGCAACTAATAACTTTAGTCATCTTGGACATTAGTTCCAACCAAATCCTCGGTAGCTTACCAAAAGAAATTGGACAACTCGCTAAACTTGTAGTTCTAGACCTCTCAAATAACATGCTAGATGCAGTCATACCAAACCGAATAGGGAATCTAAGACATTTAGTCACCTTAAACTTGAGTTACAACAATATTTCCGGTAGCATACCACCAGAAATCGGACGACTTTTTCTTCTTGAAACTCTAGACCTCTCGCATAATAGACTAATAGGAAACATACCCGATCAAGTGGGTAGAGATCCTCTTTCTGTTTCAGTTGCTAACTTCAGTCACAATAGGATTGGTGGAGAGATACCAAATAATTTGGGCAACTTACCAGACTACACTCAATTGGATTTGAGCTATAATAATCTCATTGGTAACATACCTAAACAACTTGGTATGCTCAAACTCATCAACTTGTCATACAACTCCCTTAGTGGGTATGTCCCAATGGAAATTTATTGCTCATTTCCTCACAACATATTGCAAGGTAATAAGAAACTACTTGGTCTACAAAAGGATCTTTCTTGTTCTAACCACACCACTACTCCTTCTCCTGCTGAGAAGCTGAAGCGTTACTTAAGGATCATCCTTCCTTTGACAATTTTCCTTGGCTTCCTTTTTATTGGAGCATTGATATTTACTCGATATCTGCACAAGAAAAAAAAGCCAAAGACAATAGTACAAAGAAATGGAGACATATTCTCAGTTTGGAATTATGATGGTAAAATCGCATTCGAAGACATCATTGGAGTTACAGAAGACTTTGATATCAAGTACTGTATTGGAACTGGTGCTTATGGAAGTGTCTATAAGGCATCACTTCCTAGTGGTCGAATTGTTGCATTGAAAAAGCTTCATGGGACTGAATTTCAAGATCCATCATTTTCCAAGAGCTTCCACAATGAGGTCAAGATGTTGACTGAAATCCGACATCGCAACATCGTGAAACTTCATGGTTTTTGTTTGCACAACAGATGCATGTTTCTCATTTACGAGTACATGGAAAGGGGAAGCCTTTTTTATGTCTTGAGGAATGATGCTGAAGCTGAAGAATTGAATTGGAGCAAGAGGGTGAATGTCATTAAAGGAATAGCAAATGCCTTGTCTTACATGCATGATTGTAAGCCATCAATAATTCATCGAGACATAACAAGTAGCAACATATTGTTGAACTCAAGCATGGAAGCTTTTGTCTCAGACTTTGGCACAGCTCGAATCCTAGATCCAGATTCATCCAATCAAACTCTTCTAGTTGGTACATATGGTTATGTTGCCCCTGAACTTGCATACACATTGTTGGTGACTGAAAAATGTGATGTTTATAGTTTTGGTGTGGTAACATTAGAAACAATCATGGGAAGACATCCAGGAGAGTTGATCTTTTCTTTGTCAAAGACTAATTCTACTCAAAGCATAATTCTTAAAGATGTCTTAGACTCACGTCTCCCACTTCCTTTGAAGAAAGATGCTCAAGATGTTGTTCTTTTGGTCACAATAGCACTATCATGCTTGAGTTCCACACCAAAATCTCGACCATCAATGCAGCAAGTGGCACAACAACTTTCAGTTTCCAAACAACCTTTTCATGTTTGTTTTGAAGAAATTTCACTACAGCAATTGATGAATCGAGATATGTTTGTTGTAGGAAGAAATTAG | 1728 | 0.3791 | MLNASIPHQIWQLITLVILDISSNQILGSLPKEIGQLAKLVVLDLSNNMLDAVIPNRIGNLRHLVTLNLSYNNISGSIPPEIGRLFLLETLDLSHNRLIGNIPDQVGRDPLSVSVANFSHNRIGGEIPNNLGNLPDYTQLDLSYNNLIGNIPKQLGMLKLINLSYNSLSGYVPMEIYCSFPHNILQGNKKLLGLQKDLSCSNHTTTPSPAEKLKRYLRIILPLTIFLGFLFIGALIFTRYLHKKKKPKTIVQRNGDIFSVWNYDGKIAFEDIIGVTEDFDIKYCIGTGAYGSVYKASLPSGRIVALKKLHGTEFQDPSFSKSFHNEVKMLTEIRHRNIVKLHGFCLHNRCMFLIYEYMERGSLFYVLRNDAEAEELNWSKRVNVIKGIANALSYMHDCKPSIIHRDITSSNILLNSSMEAFVSDFGTARILDPDSSNQTLLVGTYGYVAPELAYTLLVTEKCDVYSFGVVTLETIMGRHPGELIFSLSKTNSTQSIILKDVLDSRLPLPLKKDAQDVVLLVTIALSCLSSTPKSRPSMQQVAQQLSVSKQPFHVCFEEISLQQLMNRDMFVVGRN | 575 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto1g1706 | 575 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 402 | 414 | IPR008266 | GO:0004672|GO:0006468 | |
Sto1g1706 | 575 | ProSiteProfiles | Protein kinase domain profile. | 279 | 553 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto1g1706 | 575 | Gene3D | Phosphorylase Kinase; domain 1 | 240 | 357 | - | - | |
Sto1g1706 | 575 | SMART | LRR_typ_2 | 85 | 109 | IPR003591 | - | |
Sto1g1706 | 575 | SMART | LRR_typ_2 | 61 | 84 | IPR003591 | - | |
Sto1g1706 | 575 | SMART | LRR_typ_2 | 37 | 60 | IPR003591 | - | |
Sto1g1706 | 575 | Gene3D | Transferase(Phosphotransferase) domain 1 | 358 | 559 | - | - | |
Sto1g1706 | 575 | Pfam | Protein kinase domain | 283 | 543 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Sto1g1706 | 575 | PRINTS | Leucine-rich repeat signature | 40 | 53 | - | - | |
Sto1g1706 | 575 | PRINTS | Leucine-rich repeat signature | 85 | 98 | - | - | |
Sto1g1706 | 575 | SUPERFAMILY | L domain-like | 5 | 176 | - | - | |
Sto1g1706 | 575 | Pfam | Leucine rich repeat | 15 | 74 | IPR001611 | GO:0005515 | |
Sto1g1706 | 575 | ProSitePatterns | Protein kinases ATP-binding region signature. | 285 | 307 | IPR017441 | GO:0005524 | |
Sto1g1706 | 575 | ProSiteProfiles | Leucine-rich repeat profile. | 63 | 85 | IPR001611 | GO:0005515 | |
Sto1g1706 | 575 | PANTHER | FLAGELLIN-SENSING-LIKE PROTEIN | 54 | 564 | - | - | |
Sto1g1706 | 575 | PANTHER | FLAGELLIN-SENSING-LIKE PROTEIN | 2 | 106 | - | - | |
Sto1g1706 | 575 | SUPERFAMILY | Protein kinase-like (PK-like) | 266 | 546 | IPR011009 | - | |
Sto1g1706 | 575 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 2 | 106 | - | - | |
Sto1g1706 | 575 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 54 | 564 | - | - | |
Sto1g1706 | 575 | Gene3D | Ribonuclease Inhibitor | 1 | 207 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto1g1706 | Sto-Chr1 | 25129097 | 25131108 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto1g1706 | 2 | 450 | Receptor kinase-like Gene Family | AT4G08850 | 42.765 | 3.27e-106 | 340 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Sto1g1706 | Pkinase | 7.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto1g1706 | - | - | gmx:100789677 | 603.979 |