Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1706 ATGCTAAATGCAAGCATACCCCACCAAATATGGCAACTAATAACTTTAGTCATCTTGGACATTAGTTCCAACCAAATCCTCGGTAGCTTACCAAAAGAAATTGGACAACTCGCTAAACTTGTAGTTCTAGACCTCTCAAATAACATGCTAGATGCAGTCATACCAAACCGAATAGGGAATCTAAGACATTTAGTCACCTTAAACTTGAGTTACAACAATATTTCCGGTAGCATACCACCAGAAATCGGACGACTTTTTCTTCTTGAAACTCTAGACCTCTCGCATAATAGACTAATAGGAAACATACCCGATCAAGTGGGTAGAGATCCTCTTTCTGTTTCAGTTGCTAACTTCAGTCACAATAGGATTGGTGGAGAGATACCAAATAATTTGGGCAACTTACCAGACTACACTCAATTGGATTTGAGCTATAATAATCTCATTGGTAACATACCTAAACAACTTGGTATGCTCAAACTCATCAACTTGTCATACAACTCCCTTAGTGGGTATGTCCCAATGGAAATTTATTGCTCATTTCCTCACAACATATTGCAAGGTAATAAGAAACTACTTGGTCTACAAAAGGATCTTTCTTGTTCTAACCACACCACTACTCCTTCTCCTGCTGAGAAGCTGAAGCGTTACTTAAGGATCATCCTTCCTTTGACAATTTTCCTTGGCTTCCTTTTTATTGGAGCATTGATATTTACTCGATATCTGCACAAGAAAAAAAAGCCAAAGACAATAGTACAAAGAAATGGAGACATATTCTCAGTTTGGAATTATGATGGTAAAATCGCATTCGAAGACATCATTGGAGTTACAGAAGACTTTGATATCAAGTACTGTATTGGAACTGGTGCTTATGGAAGTGTCTATAAGGCATCACTTCCTAGTGGTCGAATTGTTGCATTGAAAAAGCTTCATGGGACTGAATTTCAAGATCCATCATTTTCCAAGAGCTTCCACAATGAGGTCAAGATGTTGACTGAAATCCGACATCGCAACATCGTGAAACTTCATGGTTTTTGTTTGCACAACAGATGCATGTTTCTCATTTACGAGTACATGGAAAGGGGAAGCCTTTTTTATGTCTTGAGGAATGATGCTGAAGCTGAAGAATTGAATTGGAGCAAGAGGGTGAATGTCATTAAAGGAATAGCAAATGCCTTGTCTTACATGCATGATTGTAAGCCATCAATAATTCATCGAGACATAACAAGTAGCAACATATTGTTGAACTCAAGCATGGAAGCTTTTGTCTCAGACTTTGGCACAGCTCGAATCCTAGATCCAGATTCATCCAATCAAACTCTTCTAGTTGGTACATATGGTTATGTTGCCCCTGAACTTGCATACACATTGTTGGTGACTGAAAAATGTGATGTTTATAGTTTTGGTGTGGTAACATTAGAAACAATCATGGGAAGACATCCAGGAGAGTTGATCTTTTCTTTGTCAAAGACTAATTCTACTCAAAGCATAATTCTTAAAGATGTCTTAGACTCACGTCTCCCACTTCCTTTGAAGAAAGATGCTCAAGATGTTGTTCTTTTGGTCACAATAGCACTATCATGCTTGAGTTCCACACCAAAATCTCGACCATCAATGCAGCAAGTGGCACAACAACTTTCAGTTTCCAAACAACCTTTTCATGTTTGTTTTGAAGAAATTTCACTACAGCAATTGATGAATCGAGATATGTTTGTTGTAGGAAGAAATTAG 1728 0.3791 MLNASIPHQIWQLITLVILDISSNQILGSLPKEIGQLAKLVVLDLSNNMLDAVIPNRIGNLRHLVTLNLSYNNISGSIPPEIGRLFLLETLDLSHNRLIGNIPDQVGRDPLSVSVANFSHNRIGGEIPNNLGNLPDYTQLDLSYNNLIGNIPKQLGMLKLINLSYNSLSGYVPMEIYCSFPHNILQGNKKLLGLQKDLSCSNHTTTPSPAEKLKRYLRIILPLTIFLGFLFIGALIFTRYLHKKKKPKTIVQRNGDIFSVWNYDGKIAFEDIIGVTEDFDIKYCIGTGAYGSVYKASLPSGRIVALKKLHGTEFQDPSFSKSFHNEVKMLTEIRHRNIVKLHGFCLHNRCMFLIYEYMERGSLFYVLRNDAEAEELNWSKRVNVIKGIANALSYMHDCKPSIIHRDITSSNILLNSSMEAFVSDFGTARILDPDSSNQTLLVGTYGYVAPELAYTLLVTEKCDVYSFGVVTLETIMGRHPGELIFSLSKTNSTQSIILKDVLDSRLPLPLKKDAQDVVLLVTIALSCLSSTPKSRPSMQQVAQQLSVSKQPFHVCFEEISLQQLMNRDMFVVGRN 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1706 575 ProSitePatterns Tyrosine protein kinases specific active-site signature. 402 414 IPR008266 GO:0004672|GO:0006468
Sto1g1706 575 ProSiteProfiles Protein kinase domain profile. 279 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1706 575 Gene3D Phosphorylase Kinase; domain 1 240 357 - -
Sto1g1706 575 SMART LRR_typ_2 85 109 IPR003591 -
Sto1g1706 575 SMART LRR_typ_2 61 84 IPR003591 -
Sto1g1706 575 SMART LRR_typ_2 37 60 IPR003591 -
Sto1g1706 575 Gene3D Transferase(Phosphotransferase) domain 1 358 559 - -
Sto1g1706 575 Pfam Protein kinase domain 283 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1706 575 PRINTS Leucine-rich repeat signature 40 53 - -
Sto1g1706 575 PRINTS Leucine-rich repeat signature 85 98 - -
Sto1g1706 575 SUPERFAMILY L domain-like 5 176 - -
Sto1g1706 575 Pfam Leucine rich repeat 15 74 IPR001611 GO:0005515
Sto1g1706 575 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Sto1g1706 575 ProSiteProfiles Leucine-rich repeat profile. 63 85 IPR001611 GO:0005515
Sto1g1706 575 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 54 564 - -
Sto1g1706 575 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 2 106 - -
Sto1g1706 575 SUPERFAMILY Protein kinase-like (PK-like) 266 546 IPR011009 -
Sto1g1706 575 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 106 - -
Sto1g1706 575 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 54 564 - -
Sto1g1706 575 Gene3D Ribonuclease Inhibitor 1 207 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1706 Sto-Chr1 25129097 25131108 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1706 2 450 Receptor kinase-like Gene Family AT4G08850 42.765 3.27e-106 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto1g1706 Pkinase 7.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1706 - - gmx:100789677 603.979