Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1702 ATGTCTCTGCTTCTCGTTCTCTACCTCCTGGCCGGAATCCTCCAGGTCTTTCCTACAAgtgcttcttctttctctcctgAGCTTGACGCTCTAATGGCTATCAAGGACTCTTTGGATCCGGAAAACCGATTTCTGAGGTCTTGGAGTTCAGATTCGGACCCTTGTGGCGGCGGTTTCGAAGGCGTCGCGTGCAACGAGGTAGGGCGCGTGACGAATATCTCGCTGCAAGGGAAGGGTCTGTATGGGAGGTTACCGGCAGCTGTGGGTGAGCTGAGGAGCTTGACCGGTCTCTACTTGCACTTCAATGCTCTCACTGGGGTGGTGCCGAAGGAGATTACCGGTTTGAGTGAGCTCAGTGATTTGTATCTCAATGTTAATAATCTCTCCGGTGATATCCCAAGGGAGATTGGTAATATGACTAATCTTCAAGGGAGTATACCAACAGAAATGGGAAAGCTGAGGAGGCTAAGTGTTCTTGCATTGCAATACAATGAACTAAATGGTGCAATTCCAGCAAGTTTGGGTGAATTGGAGGCACTGACGAGGTTGGATTTGAGCTTCAATACACTTTTTGGTCCAATTCCAGTGGGAATAGCTCGTGCCCCTAAACTTCAAGTCCTTGATATAAGGAATAATTCTCTGTCAGGCAATGTCCCAATAGCTCTAAAAAGACTCAGAAGCGGATTCCAGTACATGAACAACCCTGGTTTATGTGGGACAGAATTCAATTTAGTTTCATGCAAAACTTTTTTCGATCCGGACAAACCCGAGCCCTTTGAACCTAGCAATCTTTCCACAAAGGATCTTCCAGCATCAGTGAATCCAAAAGATGAGAACCAATTGCAATCTTCAAAAATAGGCCTAGTTTTCGGTATCATCGCAGTTATTTTCGCCTCCGCGATCTCCGGTCTCTCTATTTTCGTGTGGTACCGACATCGAAAACAGAAGATTGGGAACACAATTGATGCTTCTGATAGCACTCATCTTCATAGGAAAAACAATGCTGCTCCTCTCATCAGTTTAGAGTATTCCAATGGATGGGATCCTTTGTCCAAAGGGAAGAGTGGCTATTCTCAAGAAGTCCTAGAGAGTTTCATGTTCAACCTCGAAGAGATAGAGCGAGCGACTCAATGCTTCTCCGGCGCGAATTTATTGGGGAAGAGTAATTTTTCGAGTATTTACAAAGGAATTATGAGGGATGGATGTGTGGTGGTTGTGAAATGCATCAACAAGACAAGTTGTAAGTCTAATGAAGATGAGTTCTTGAAAGGTTTGAAGATAGTGACATGGCTGAAGCACGAGAACCTCGTCCGGTTTCGAGGCTTTTGTTGTTCTAAAGGAAGGGGAGAATGCTTTCTTGTGTATGATTTTGCTCCAAATGGGAGTTTGTCTCAATATCTTGATGTGAAGAAAGGGGATGCATCATCATGTAGGGTTTTGGAATGGTCCACTAGAGTGTCCATCATTCATGGTATTGccaaagGTATTGCTTATCTTcatgaaaagaaaggaagaaaagagcCTCTAGTTCACCAAAATATTTCAGCAGAAAAAGTGCTTCTCAATGCATATTACAATCCCTTACTTTCAGACTCAGGAATGCACAAACTCCTAGCAGATGATGTTGTCTTCTCCACTCTCAAAGCTACTGCTGCCATGGGATACCTTGCCCCAGAATACACAACCACTGGTTGTTTCACACAGAAGAGTGACATTTTTGCTTTTGGAGTCATAGTTTTCCAGCTTCTCACCGGAAAAAGCGATACCACTCACTTAAATCGCCACGAACTAGAAGAAGCACTTGAATTCAAAGATTTTATTGATGAGAACCTCGAAGGGAAGTTCTCGGAATCGCAGGCTGCTAAACTTGTGAGAATTGCCCTGCTTTGCACGCACGAATCGTCCCACGAACGGCCATCTATGGACTACGTGGTTCAAGAACTCAGTGAAAACTAA 1956 0.432 MSLLLVLYLLAGILQVFPTSASSFSPELDALMAIKDSLDPENRFLRSWSSDSDPCGGGFEGVACNEVGRVTNISLQGKGLYGRLPAAVGELRSLTGLYLHFNALTGVVPKEITGLSELSDLYLNVNNLSGDIPREIGNMTNLQGSIPTEMGKLRRLSVLALQYNELNGAIPASLGELEALTRLDLSFNTLFGPIPVGIARAPKLQVLDIRNNSLSGNVPIALKRLRSGFQYMNNPGLCGTEFNLVSCKTFFDPDKPEPFEPSNLSTKDLPASVNPKDENQLQSSKIGLVFGIIAVIFASAISGLSIFVWYRHRKQKIGNTIDASDSTHLHRKNNAAPLISLEYSNGWDPLSKGKSGYSQEVLESFMFNLEEIERATQCFSGANLLGKSNFSSIYKGIMRDGCVVVVKCINKTSCKSNEDEFLKGLKIVTWLKHENLVRFRGFCCSKGRGECFLVYDFAPNGSLSQYLDVKKGDASSCRVLEWSTRVSIIHGIAKGIAYLHEKKGRKEPLVHQNISAEKVLLNAYYNPLLSDSGMHKLLADDVVFSTLKATAAMGYLAPEYTTTGCFTQKSDIFAFGVIVFQLLTGKSDTTHLNRHELEEALEFKDFIDENLEGKFSESQAAKLVRIALLCTHESSHERPSMDYVVQELSEN 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1702 651 SUPERFAMILY Protein kinase-like (PK-like) 356 648 IPR011009 -
Sto1g1702 651 Pfam Protein tyrosine and serine/threonine kinase 384 648 IPR001245 GO:0004672|GO:0006468
Sto1g1702 651 CDD STKc_IRAK 385 650 - -
Sto1g1702 651 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 5 650 - -
Sto1g1702 651 Gene3D Phosphorylase Kinase; domain 1 351 457 - -
Sto1g1702 651 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Sto1g1702 651 Gene3D Ribonuclease Inhibitor 24 140 IPR032675 -
Sto1g1702 651 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 650 - -
Sto1g1702 651 SUPERFAMILY L domain-like 25 226 - -
Sto1g1702 651 Gene3D Transferase(Phosphotransferase) domain 1 458 651 - -
Sto1g1702 651 Gene3D Ribonuclease Inhibitor 141 240 IPR032675 -
Sto1g1702 651 ProSiteProfiles Protein kinase domain profile. 379 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1702 Sto-Chr1 25096751 25102820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1702 1 495 Miscellaneous Gene Families AT4G22730 48.588 2.17e-164 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Sto1g1702 PK_Tyr_Ser-Thr 3.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1702 - - pop:7484258 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1702 1 25096751 25102820 Sto1g1702 1 25096751 25102820 ECH