Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1695 ATGTGTGCTGGGAATCTCGCCACTCACCATGGAAATAGCCTCATGGGAATCTGTTTCAACGTCTACATCTCTGAACCCATGTTCCCACAAAATTTTCAAGCCTATGAGTATGCCTCTCAGCTCAGCCAACAGCACCGAGCACGTTCCAATAAGCACATTCCATGGAATCTGACAATTCTTCCGGTGGGATTTAGATTTCATCCTACGGAACAAGAGCTCCTCCAATATCTACACAAGAAAGTGATGAACCAACCCATGATGTTTTACATTCCAGAAGTTCAAGTATGGCAACACAATCCTAAACAACTTGCAGATGATTATCCCCCTATAAATCGTGGAGAACATGAGTGGTACTTTTTCTCTCCAAGGGAGAAATTATATGCAAAAGGAAATGTAACGAAACGAACAGTACCAGGTGGATATTGGAATGCTAGTGGAAAAGAGTGTTCATCAGTTTTGTTTGAAGGAAATGAGATTGGAAAATGGAGAACAATGATTTTTCATGAAGGAAAACGTGGAGATGAAGTTCAAGTATGGCAACACAATCCTAAACAACTTGCAGCTTCTTCTCCAAAAATCTTGGATCCAATTCACAAGTTGAGCACAAGGATGGGTGCAGGGAATCTCGCCACTCACCATGAAAATAGCCTCATGGGAATCTGTTTCAACGTCGACATCTCTGAACCCATGTTCCCACAAAATTTCCAAGCCTATGAGTATGCCTCTCAGCTCAGCCAACAGCACTGA 747 0.4244 MCAGNLATHHGNSLMGICFNVYISEPMFPQNFQAYEYASQLSQQHRARSNKHIPWNLTILPVGFRFHPTEQELLQYLHKKVMNQPMMFYIPEVQVWQHNPKQLADDYPPINRGEHEWYFFSPREKLYAKGNVTKRTVPGGYWNASGKECSSVLFEGNEIGKWRTMIFHEGKRGDEVQVWQHNPKQLAASSPKILDPIHKLSTRMGAGNLATHHENSLMGICFNVDISEPMFPQNFQAYEYASQLSQQH 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1695 248 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 50 172 - -
Sto1g1695 248 SUPERFAMILY NAC domain 52 176 IPR036093 GO:0003677|GO:0006355
Sto1g1695 248 PANTHER NAC TRANSCRIPTION FACTOR 56 50 172 - -
Sto1g1695 248 ProSiteProfiles NAC domain profile. 60 203 IPR003441 GO:0003677|GO:0006355
Sto1g1695 248 Gene3D NAC domain 69 191 IPR036093 GO:0003677|GO:0006355
Sto1g1695 248 Pfam No apical meristem (NAM) protein 61 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1695 Sto-Chr1 25023137 25041833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1695 58 177 NAC Transcription Factor Family AT5G64060 41.129 2.87e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto1g1695 NAM 1.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1695 - - sind:105162953 102.064