Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1676 ATGTCGACGTACTTGAATCTTGAAGATTTCAAAGGTCGGAAGTTCAATCCACATTGGACTCGCTTTGAGATTCTACTAGAAGTTGCGCAAGTTGCTCGTGAAAAGGTAATTGACGCAAGTATTATTGATGATCATGGTAATGTCAAAGTCACGAAAGACCAAGTATTATTGAAGCCGCCTCAGGAGGAACCCAAACCCATTGATGCTCATGCTATAGTTGGAACACCCAGCAAGAGACAAAAGTTGAATGGCTCTCCCACGGACACTAAAACCTCAGCATCCAACGAGAAGGCAAAGGAAGAAGCAAAGCATCCGAAACGAAACAACGTCATAATCAAACAAATCTTGCCAACCCAAGCAAGAGCAATATCGCTGGGCCCCTCATCGTCACAACCTACTTTACCGCCAGAATATGAAGTAGAATTCATGGGTAGAATCGACATGACAAGACCAAAGGGTGAGATCAACCTGACTCGCCTAATCAAGAAAAACCTATTTCAGACCGACGTGAGCAAAGGTCAGGGACGACTCTCCATGCCGTTCAGCCAGATCGAGAACTTTGAGTTCTTGAAGGACGGTGAAAGGGCACAGATAGAGCAGAAGATGTCCGTCAAAGCAACATTGATTCACAAACCGACGGGTGAAGGTGAAGCGATTATTGAATCGGATATAGAGCTCACGGAGTGGGTGATGCACAAAGGGACAAAGCAAAAGGAGAGCCACATGTATGTTTTGAGGAGTGGGTGGAACAAAATAGTGGAGAGTGATGGTCTCAAGTGTGGAGACCTTGTTGAAGTGTGGTGCTTTAGAAACCATGAGGATAGACTGTGCATAATTCTTGTGGTATTGGAGAGAGCAGGGGCCATAGCTTCTGAGCTTCCTGCTCAAGCTTCTTGTTCTGCATCTCCTTCTGGTAATTGTATGCATCCTTATCAGTCTCAATCATGCCTTTTGGACCAATGGTGGTACCAATCATTCCTCCCTTTGCAACAAACTCTTGCATGGCTTCTTCATCCCCAGGATATGGGAACTCCCGCCGCTCGTACAGGTGGGCTAGCTCACGCTCCTCCTTGGGCCGTGGCTTCAGCGTCCACCACCCCAGTGGTGATGTTTCATTGTACACCCACACTGCACCCATTATGGTGTAGGTGCAAAGCAAAGCCTTCCCTACTTGTTTCCAGAAGTAGTGATCTTCCTTTCCCAATCCTATTTTCTTCAGAAAGTTCTCCAGTTGGAATCCTGAGTTTCAAAACGTATCAACAACACGTTGggctaaaagaaagaaaactctcCAAAATTTTGTGTCAAAAATTTCATCCAATGGTTTGA 1329 0.45 MSTYLNLEDFKGRKFNPHWTRFEILLEVAQVAREKVIDASIIDDHGNVKVTKDQVLLKPPQEEPKPIDAHAIVGTPSKRQKLNGSPTDTKTSASNEKAKEEAKHPKRNNVIIKQILPTQARAISLGPSSSQPTLPPEYEVEFMGRIDMTRPKGEINLTRLIKKNLFQTDVSKGQGRLSMPFSQIENFEFLKDGERAQIEQKMSVKATLIHKPTGEGEAIIESDIELTEWVMHKGTKQKESHMYVLRSGWNKIVESDGLKCGDLVEVWCFRNHEDRLCIILVVLERAGAIASELPAQASCSASPSGNCMHPYQSQSCLLDQWWYQSFLPLQQTLAWLLHPQDMGTPAARTGGLAHAPPWAVASASTTPVVMFHCTPTLHPLWCRCKAKPSLLVSRSSDLPFPILFSSESSPVGILSFKTYQQHVGLKERKLSKILCQKFHPMV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1676 442 MobiDBLite consensus disorder prediction 93 107 - -
Sto1g1676 442 MobiDBLite consensus disorder prediction 73 107 - -
Sto1g1676 442 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 58 286 IPR005508 GO:0003677
Sto1g1676 442 MobiDBLite consensus disorder prediction 78 92 - -
Sto1g1676 442 Gene3D - 152 286 IPR015300 -
Sto1g1676 442 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 58 286 - -
Sto1g1676 442 Pfam B3 domain-containing protein At2g31720-like 148 254 IPR005508 GO:0003677
Sto1g1676 442 SUPERFAMILY DNA-binding pseudobarrel domain 160 278 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1676 Sto-Chr1 24850705 24853983 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1676 156 270 B3 DNA Binding Superfamily AT1G05930 31.034 4.88e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1676 - - dzi:111317691 98.5969