Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1661 ATGGAAGCAAGAGAAGGAATGAGTTCAGGGATTACAGTGATAGGAGCTGAAGCTCCATCGGCCTATCACATGGCGCCAAGGAGTGAAGCTCCGAGCCAGAGTCATGTTCCGGAAGCAGCAACACTACCGGCAGCTGGTGTTGGCgcctcgccgatgagtgtgggATTGGATGTGACGACAATGAAGAAGAAAAGGGGTAGACCGAGGAAGTATGGACCGAATGGGTCCGTCAGTATGGCATTGTCGCCATTGCCGATCTCATCTTCAACTCCGCTTTCAAATAACTTTCCGACTGGGAAGCGGGGGAAACCGAAGGGGATGGAGTACAAGCAGAACGACAAAGATGGGTTTGAGCATCTAGGTGACTTGAATGGATGTTCTATTGGTACAAACTTTATGCCTCATATCATCACTGTCAATTCTGGTGAGGACATTACAATGAAGGTTATATCGTTTTCTCAACAAGGACCGCGCGCTATATGCATCTTGTCTGCTAATGGTGTCATTTCAAACGTAACGCTTCGTCAGCCGGATTCTTCTGGGGGTACTTTGACCTATGAGGGCCGATTTGAGATACTCTCGTTGTCTGGATCATTCATGCCTACCGAAAGCCAAGGAACAAGAGGCCGGTCGGGCGGGTTGAGTGTCTCTTTGGCGAGCCCGGATGGGCGTGTCGTAGGTGGCGGTGTTGCTGGTCTTCTTATAGCTGCCACTCCTGTGCAGGTGGTGGTGGGAAGCTTTCTTCCGAGCAGCCATCAAGATCAGAGACCGAAGAAGTCTTCCAAATCTAATTACAATGCTCCGCCTTTAACTGTCGATCCGGTACCATTATCGGTGTCTTCTACGCCGCCCTCCACTCATTCCGAAAAAGACAACGGCGGCGGAGGCGGCGGTATCGATGGACACTTGCTGCAAAATTCCAACGCGCTGAACTCGAGCCTTCATTCGCCAAACGCCTTCCAACGAGAAAACTGGGTTAACATGCACTCCATGATGGACTCGCGGAAATCAACTACTGATATCAACATATCTCTGccggataattaa 1047 0.4871 MEAREGMSSGITVIGAEAPSAYHMAPRSEAPSQSHVPEAATLPAAGVGASPMSVGLDVTTMKKKRGRPRKYGPNGSVSMALSPLPISSSTPLSNNFPTGKRGKPKGMEYKQNDKDGFEHLGDLNGCSIGTNFMPHIITVNSGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTESQGTRGRSGGLSVSLASPDGRVVGGGVAGLLIAATPVQVVVGSFLPSSHQDQRPKKSSKSNYNAPPLTVDPVPLSVSSTPPSTHSEKDNGGGGGGIDGHLLQNSNALNSSLHSPNAFQRENWVNMHSMMDSRKSTTDINISLPDN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1661 348 MobiDBLite consensus disorder prediction 62 83 - -
Sto1g1661 348 SUPERFAMILY AF0104/ALDC/Ptd012-like 132 253 - -
Sto1g1661 348 MobiDBLite consensus disorder prediction 275 289 - -
Sto1g1661 348 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 347 - -
Sto1g1661 348 MobiDBLite consensus disorder prediction 249 315 - -
Sto1g1661 348 CDD DUF296 134 247 IPR005175 -
Sto1g1661 348 Gene3D - 134 264 - -
Sto1g1661 348 Pfam Plants and Prokaryotes Conserved (PCC) domain 134 247 IPR005175 -
Sto1g1661 348 ProSiteProfiles PPC domain profile profile. 129 268 IPR005175 -
Sto1g1661 348 MobiDBLite consensus disorder prediction 249 268 - -
Sto1g1661 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 347 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1661 Sto-Chr1 24729965 24736149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1661 1 345 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 47.733 2.08e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1661 - - gmx:100796830 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0966 6 9597698 9604608 Sto1g1661 1 24729965 24736149 CCT