Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1657 ATGGATTGTGAGGGAGGAGGTAAGAGTAATAGTAATAGTAAGggaggaggaggtggtggtCCATGCGGCGCGTGCAAGTTCCTGCGGCGGAAGTGCGTGAGAGGGTGCATATTCGCGCCGTATTTCGAGTCGGAGCAAGGCGCGGCTCACTTCGCGGCGGTTCACAAGGTGTTCGGCGCCAGCAACGCCTCCAAGCTGCTCTCTCGCATCCCCACGCACCACCGGCTCGACGCCGTCCTCACTCTCTCCTACGAGGCTCTCGCTAGGGCCAAGGATCCTGTCTATGGCTGCGTCGCCCACATCTTCGTCCTTCAACACCAGGTAGTGAAATTGCAGGCAGAATTGGCTTATGTTCAAGCTCGTCTCTCCACATTGCAACACATAGCAGCAActccaccatttccatttccatttcctcaCGAAACCTCATCTTCTTCAGACACTCACATTTCCATCATGCATTATGTTGATCATAATAATATTCATCTTCAACCTCTTCCTCCATCACTAACCACTCTTCTCAATCCATCCCATGATGATAATTTGCAAGACTCGGCTCAAGAGTTCGCGCTGATGTACTTGGCCGCCGGATCAGGACCGAGATTTTAG 609 0.4844 MDCEGGGKSNSNSKGGGGGGPCGACKFLRRKCVRGCIFAPYFESEQGAAHFAAVHKVFGASNASKLLSRIPTHHRLDAVLTLSYEALARAKDPVYGCVAHIFVLQHQVVKLQAELAYVQARLSTLQHIAATPPFPFPFPHETSSSSDTHISIMHYVDHNNIHLQPLPPSLTTLLNPSHDDNLQDSAQEFALMYLAAGSGPRF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1657 202 PANTHER LOB DOMAIN CONTAINING PROTEIN 14 192 - -
Sto1g1657 202 Pfam Lateral organ boundaries (LOB) domain 21 119 IPR004883 -
Sto1g1657 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 14 192 - -
Sto1g1657 202 ProSiteProfiles LOB domain profile. 20 122 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1657 Sto-Chr1 24704180 24710450 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1657 17 160 AS2 family AT4G00210 63.194 6.72e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto1g1657 LOB 7.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1657 - - cpap:110819475 207.994