Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1655 ATGCCGGGGTGCATTTTCGCGCCGTACTTCGACTCGGACCAGGGCGCGACGCTCTTCGCAGCGGTGCACCGGGTCTTCGGGGCGAGCAACGTGTCGAAGCTGCTGCAGAATATCCCAGTGCACAAACGGCTCGACGCGGCGGTTACTATTTGCTATGAAGCTCAGGCGAGGCTGAGAGATCCTGTGTATGGATGTGTGATGACCTTACAAGCTGAACTCTCTTACTTACAAGGCCATCTTGCTACGTTAGAGTCGCCTCTGTCACAATCGACAACGCTGCCTTGCGCAATCTCACTGACTGATGACGTACCGTCTGGTGTTTCCGATGCATCGTCAACATATgatctctcttcactttttgaTCCCATGCCCCAAAATACATGGGCCACACAGCAACGGCCCATGGGCGCAAACCAATATGTGGGCGGCGGCCCGTCACATATTAACAGTGGTGCTGGTGGTGGAAATGGCGATCTTCAAACGTTGGCTCGCGAGTTTTTGGATAGGCATAGGTCTCCGCCCATAGCCGCCTCTTCAACTCAATCACTTTCCAAATGA 558 0.5251 MPGCIFAPYFDSDQGATLFAAVHRVFGASNVSKLLQNIPVHKRLDAAVTICYEAQARLRDPVYGCVMTLQAELSYLQGHLATLESPLSQSTTLPCAISLTDDVPSGVSDASSTYDLSSLFDPMPQNTWATQQRPMGANQYVGGGPSHINSGAGGGNGDLQTLAREFLDRHRSPPIAASSTQSLSK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1655 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 172 - -
Sto1g1655 185 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 172 - -
Sto1g1655 185 Pfam Lateral organ boundaries (LOB) domain 2 82 IPR004883 -
Sto1g1655 185 ProSiteProfiles LOB domain profile. 1 90 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1655 Sto-Chr1 24678012 24681056 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1655 1 178 AS2 family AT2G45420 51.961 1.99e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto1g1655 LOB 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1655 K21994 - gmx:100798425 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g0963 6 9549699 9555202 Sto1g1655 1 24678012 24681056 CCT