Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1650 ATGGCGGCAAATCCTCCTGCGAACAGTGCCAAAAGTTCTATAGCAGCGATTTCGCAGGAGAAATCGCGTCGTTCCGTATTCGAACTTCCACCTGACTTCTTCCACTCCTGTCGCCTCCTTCCTTCTCCTCACTCTTCCGTCTCCGAGCACTTTCAAGACTCCGATGACTCGGTCCGCGAAACCCTTGACCTAATTGAGAACGACGCTATTGGCACCCGAGACGTCGCCGTTTCGGTGCATAGGTGGACCTGCAATACTTGCAAGGTTCAATTTGAGTCCCTTCAAGACCAACGTTTGCATTTCAAGTCAGATATTCATCGGCTCAATGTGAAGTTGACAATTGCTGGAAAGAATActgtgaaggaagaagatttTGAGGCGTTGACATCTGATTCTATTAAGGACTATGATGTTTCAAGTATATCAGGATCAGAAGATGATGATAGCGAAAATGAGTCTATAACTCAAAGCGATGTCCGTAACAAATTACGTGAAAATTTAAGGCAAAAGCTATTCATCTGTCTACCGACAGGGCAGAAAGTTTCTATTTGGAAGTGCTTAATAATGAATATGAGCGAGAATATATTGTATGAGAATGACAAAGCTGAGGCTGAAGTGATTGAGAGGCTGAAATCTTTGACTCTTGAACCCAGGAATAATACCCACTTAAGAATTGTGCTGCTTGCATCTGGTGGGCACTTTGCTGGCTGTGTGTTTGATGGTGATGCAGTTGTGGCTCACAAGACATTTCACAGATATGTTGTGAGGGCTAAGGCAGGTAAAAAACAATCATCAAAAGATGCTTCTGGTAGGGCTGCGCATTCTGCAGGGGCTTCTCTTCGTCGTCATAATGAACTTGCATTAAAGAAGGAAATTCAAGAGCTGTTTAATACTTGGAGAACTTATTTCGATGCTTCAAATTGTATTTTCCTACATGCTCCTTCAAGTAGTCGTCAACTGCTCTTCGATGGAGAAAGACCTTATTTTAGCAATCAGCATTGTGTTATTAGAAATATTCCGTTGACTGTTCGAAGGCCTACTTTGAGGGAAGCAAAGCGTGTATATAACCAGTTGACCCAAGTATCCTATGAAGCAGATGAAAAAGAAGTTCTACAGTGCAATGAAGAGAATTTCGAGTCAATTCCCATCACAGTTAGAAATGCCAATCAAGCCACCAGCAAAGGGGACTTGGCTAACTTGGATGAAGAGGATAGAAGTGAAGCTTGTTCAAGCAAACAAGATGACGATAAACTGCCTATTTCAAGTGCTAGTGAGAGTGAGAATGAGATTCATGGTAAATCAACTCCTTTACATCAAGCAGTGCTATCTGGTGACTCTCACCAGGTTTTGGAACTCCTGGAACAGGGCATGGATCCTTGCATCAAAGATGAAAGGGGACGGACCCCATATATGTTGGCATGCAAGAAGGAAAGTAAGGAAGTGAGAAATACTTTCAGAAGGTTCATGGCATCAAACCCTGAAAAATGGGATTGGCACGCTGCAAAAGTGCCTAGTGCCTTAACCAAAGAAATGGAAGAATCACAAGCAGCTAAGCAGGCAGAAAAAGATGCTAAGGAAAAAGCcaaagcaaaagaaagaaaaaaattacgtAAAGCTAAAAAAAAGAAGGCCGAGGCTGAAGCTGCTAAGAGTGATAGTAAAACTGCAGAAAATCAAgtgaatgcttcaatttctagTAGTAAGGGACAGTCTCAACCCAACAGTGGATTGAAATTATCTAGAGAGGAGGAACTAAGAAGAGCACAGGctgaagaaagagaaaggagagcAGCTGCTGCAGAGAGAAGAATGGCCGCCCTTAAGATTCAAAGTGACAACGCAACTGCTGTCCCTAGCAGTTCAGTACCGAAAAGCGGAGTAGCCGGTGACATTTACTGTTCCTGTTGTAATACTTCACTCGCCGGTAAAGTTCCTTTCCATAGAATGAACACCATGAGTAAATGA 1965 0.4117 MAANPPANSAKSSIAAISQEKSRRSVFELPPDFFHSCRLLPSPHSSVSEHFQDSDDSVRETLDLIENDAIGTRDVAVSVHRWTCNTCKVQFESLQDQRLHFKSDIHRLNVKLTIAGKNTVKEEDFEALTSDSIKDYDVSSISGSEDDDSENESITQSDVRNKLRENLRQKLFICLPTGQKVSIWKCLIMNMSENILYENDKAEAEVIERLKSLTLEPRNNTHLRIVLLASGGHFAGCVFDGDAVVAHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRHNELALKKEIQELFNTWRTYFDASNCIFLHAPSSSRQLLFDGERPYFSNQHCVIRNIPLTVRRPTLREAKRVYNQLTQVSYEADEKEVLQCNEENFESIPITVRNANQATSKGDLANLDEEDRSEACSSKQDDDKLPISSASESENEIHGKSTPLHQAVLSGDSHQVLELLEQGMDPCIKDERGRTPYMLACKKESKEVRNTFRRFMASNPEKWDWHAAKVPSALTKEMEESQAAKQAEKDAKEKAKAKERKKLRKAKKKKAEAEAAKSDSKTAENQVNASISSSKGQSQPNSGLKLSREEELRRAQAEERERRAAAAERRMAALKIQSDNATAVPSSSVPKSGVAGDIYCSCCNTSLAGKVPFHRMNTMSK 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1650 654 ProSitePatterns Zinc finger C2H2 type domain signature. 84 106 IPR013087 -
Sto1g1650 654 ProSiteProfiles Ankyrin repeat region circular profile. 432 464 - -
Sto1g1650 654 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 19 650 - -
Sto1g1650 654 Pfam Bacteroidetes VLRF1 release factor 225 363 IPR041175 -
Sto1g1650 654 MobiDBLite consensus disorder prediction 1 20 - -
Sto1g1650 654 MobiDBLite consensus disorder prediction 508 604 - -
Sto1g1650 654 MobiDBLite consensus disorder prediction 514 530 - -
Sto1g1650 654 MobiDBLite consensus disorder prediction 397 422 - -
Sto1g1650 654 MobiDBLite consensus disorder prediction 394 433 - -
Sto1g1650 654 MobiDBLite consensus disorder prediction 579 602 - -
Sto1g1650 654 SUPERFAMILY beta-beta-alpha zinc fingers 71 113 IPR036236 -
Sto1g1650 654 ProSiteProfiles Ankyrin repeat profile. 432 464 IPR002110 GO:0005515
Sto1g1650 654 SUPERFAMILY Ankyrin repeat 434 494 IPR036770 -
Sto1g1650 654 MobiDBLite consensus disorder prediction 1 22 - -
Sto1g1650 654 Coils Coil 581 617 - -
Sto1g1650 654 MobiDBLite consensus disorder prediction 553 578 - -
Sto1g1650 654 Gene3D - 390 503 IPR036770 -
Sto1g1650 654 Coils Coil 507 559 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1650 21 616 C2H2 Transcription Factor Family AT1G01930 53.377 0.0 571