Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1643 ATGTATTCCTTTCTCCTTGcaatcttcttcatcatctacACCATTTACACCTATATCCATAGAAGGAGCTCCCATCATAATAATAAGTCGTCTCGAAAACTCCCTCCAGGCCCAAGCCCATACCCGATTATTGGAAATCTGTTAGAAATCGGGTCTGACCCGCTCCTATCTCTCACGAACCTCTCAAAAACATACGGACCCATCATGTCCGTCAAGCTAGGCACTAGAACCGCCATAGTCATATCTTCAACCGCCGCGGCGAAAGAAGTTCTCCACAATAACGACTTAGCCCTCTCTGGCCGGATCTGCCCGGACAGCATTCGGGCAGTTGACCATCACGTGACCTCCATGGCTTGGATTCCCATTTCATCTCAGTGGCGCGCCCTTAGGAAAGCGTGCAACACAAACATATTCTCGAGCCTACGGCTGGACTCCACGCAGCTTCTCCGCCACAAGAAGGTCGGAGACTTGCTCGAGTTCGTGGAAAAATGCAGCAGAAACGGCGACGTTTTGGACGTGGGCCGGGCCGCTTTTACGACGGTGCTGAATTCCCTCTCGAACACGTTGTTCTCGTTGGATTTCGCGGAGTTCGGATCGGGGAAGTCTCTGGAGTATCAGGAGTTGTTGAAGGGGATGGTGGATGAAGCCGGGGTTCCGAATTTGGTGGATGCTTTCCCGATTCTGAGTTTTCTTGACCCGCAAGGTGTTCGTAAGAGGACGGCGGATTATTATTCGAAGTTTCTGGAACTTCTTGATGGGATCATAGAGGAGAGATTGCGTTTTAATGCTTTGAAGAAGACCATGAAGTTGAGTAAGGAGTACAAGGATGTGTTGGATTCTTTTATTGAGCTTTTCCAAGATGAGAGTTCGGAATTGAAACGTATTGATATTCAACATTTGTTCCTGGATTTATTTATAGCTGGGACTGATACAAGTTCAagcacactagaatggataatGGCAGAATTGATACACAACCCAGAAAAAATGGCAAAAGCTAAGGCAGAACTCGAACAAATCATTGggaaaaatggtaaaattgaaGAGCATCAAGTCTCAAATTTTCCCTACTTGCAAGCCGTGGTTAAAGAAACCTTACGCCTTCACGCACCGGCTCCATTTCTACTGCCCCACACGGCTAATGAAGATGTAGAGTTATGCGGGTTCTTAATACCTAAAGATGCACAAATTCTAGTTAATGTGTGGGCTATGGGGAGGGACCCTAGCATTTGGGACAATCCTCACGTGTTCACCCCCGAAAGGTTTTTGGATACTGAAATCGATTACAGAGGATCTGGCCGTGATTTTAGGTTTATTCCATTTAGTGCCGGAAGAAGAACATGTCCGGGGTTACCCTTGGCTTCTAGGATAGTTACCTTTATGTTGGCTTCTCTTTTGTATCATTTTGATTGGAAGTTACCTGATGGATTAAAGCCAGAAGACATGGATATGAGTCAGAACTATGGAATTACTTTGCATAAGATTCAACCTTTGCGAGTTATTCCAATCAAAGTGTAG 1518 0.4433 MYSFLLAIFFIIYTIYTYIHRRSSHHNNKSSRKLPPGPSPYPIIGNLLEIGSDPLLSLTNLSKTYGPIMSVKLGTRTAIVISSTAAAKEVLHNNDLALSGRICPDSIRAVDHHVTSMAWIPISSQWRALRKACNTNIFSSLRLDSTQLLRHKKVGDLLEFVEKCSRNGDVLDVGRAAFTTVLNSLSNTLFSLDFAEFGSGKSLEYQELLKGMVDEAGVPNLVDAFPILSFLDPQGVRKRTADYYSKFLELLDGIIEERLRFNALKKTMKLSKEYKDVLDSFIELFQDESSELKRIDIQHLFLDLFIAGTDTSSSTLEWIMAELIHNPEKMAKAKAELEQIIGKNGKIEEHQVSNFPYLQAVVKETLRLHAPAPFLLPHTANEDVELCGFLIPKDAQILVNVWAMGRDPSIWDNPHVFTPERFLDTEIDYRGSGRDFRFIPFSAGRRTCPGLPLASRIVTFMLASLLYHFDWKLPDGLKPEDMDMSQNYGITLHKIQPLRVIPIKV 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1643 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Sto1g1643 505 Gene3D Cytochrome P450 19 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 SUPERFAMILY Cytochrome P450 35 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1643 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 504 - -
Sto1g1643 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 504 - -
Sto1g1643 505 Pfam Cytochrome P450 35 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1643 Sto-Chr1 24529836 24532422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1643 1 504 Cytochrome P450 AT2G45550 47.327 2.41e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1643 - K23810 gmx:100779789 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1643 1 24529836 24532422 Sto1g1643 1 24529836 24532422 ECH