Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1639 ATGTATTCCTTTCTCCTCGcaatcttcttcatcatctacACCATTTTCACCCACATCCGTCGTCGAAGAAGCTCCCACCATAAGTCGTCTCAAAAACTCCCTCCAGGCCCAAGCCCATACCCGATCATCGGAAACCTCTTAGAAATAGGATCCGACCCGCTCCTATCTCTCACCAACCTCTCCAAAACGTACGGACCCATTATGTCCGTCAAGCTGGGCACCACAACCGCTATAGTCATTACTTCAACAGAAGCAGCCAGAGAAGTTCTCAACAAAAACGACTTAGCCCTCTCTGCCCGAACCTACCCGGACAGTGTTCGGGCACTCGACCACCACATCACCTCCGTAGCTTGGATTCCCGTTTCCCATCAATGGCGTGCTCTTAGGAAAGCCATTAATACAAACATATTCTCGACTCAAAAGCTAAACTCCACGCAGATTCTCCGCCATAGGAAGGTTCAAGAATTGATGGAGTTCGTGGAAGAATGTAGTAGAAACGGTGACGTTTTGGATCTCGGCCAGGTGGCATTTACGACCGTGCTTAATTCCCTCTCCAACACGTTTTTCTCATTGGATTTCGCGGAGTTTGGATCGGGGAAGTCTTTGGAGTATAAGGAGTTGTTGGAGGGAATTGTGGATGAAGCTGGGGTTCCTAATGTGGTGGATGCTTTTCCGATTTTGAGTTTTCTTGATCTGCAAGGTGTTCGTAAGAGGACGATCAGTTACTATAAGAAGTTTTTGGGACTTCTTGATGGGATCATGGAGGAGAGATTGCGTTTCAATGCTTCGAACAAGACGACGTCGTCGACGACAATGAACTCAAGTAGGGAGTACAACGATGTGTTGGATTCATTTATTGAGCTCTTCCAAGATGAGAGTTCAGGATTGGAACGTATTGATATTCTGCATTTGTTTATGGATTTATTTATTGCTGGAACAGATACAAGCTCAAGCACTTTAGAATGGGCAATGGCAGAATTGATACACAACCCAGAAAAAATGGCAAAAGCTAAAGTAGAACTTGAACAAGTTCTTGGCAAAAATGCTAAAATTGAAGAACATGAGGTCTCAAATTTTCCTTATTTACAAGCAATATTCAAAGAAACGTTACGCCTTCACCCACCAGCTCCATTTCTACTACCTCACAAGGCTAATGACGATGTAGAGATATGTGGGTTCTTAGTGCCGCAAAATGCACAAATTCTCGTGAATGTGTGGGCTATGGGGAGGGACCCTAGTATTTGGGACAACCCTAACGTGTTTACTCCTGAAAGGTTTTTGGAGAACGACATTGATTATAGAGGATCTGGTCGTGATTTTAGGTTTATTCCATTTGGTGCTGGAAGAAGGACATGTCCTGGGTTACCCTTGGCTTCTAGGACACTTACCTTTATGTTGGCTTCTCTTTTGTATCATTTTGATTGGAAGCTACCAGATGGGTTAAAGCCAAAAGACTTGGATATGAGTCAGAACTACGGAATTACTTTGCATAAAATTCAACCTTTGCGAGCTATTCCTCTCAAAGTttag 1530 0.4333 MYSFLLAIFFIIYTIFTHIRRRRSSHHKSSQKLPPGPSPYPIIGNLLEIGSDPLLSLTNLSKTYGPIMSVKLGTTTAIVITSTEAAREVLNKNDLALSARTYPDSVRALDHHITSVAWIPVSHQWRALRKAINTNIFSTQKLNSTQILRHRKVQELMEFVEECSRNGDVLDLGQVAFTTVLNSLSNTFFSLDFAEFGSGKSLEYKELLEGIVDEAGVPNVVDAFPILSFLDLQGVRKRTISYYKKFLGLLDGIMEERLRFNASNKTTSSTTMNSSREYNDVLDSFIELFQDESSGLERIDILHLFMDLFIAGTDTSSSTLEWAMAELIHNPEKMAKAKVELEQVLGKNAKIEEHEVSNFPYLQAIFKETLRLHPPAPFLLPHKANDDVEICGFLVPQNAQILVNVWAMGRDPSIWDNPNVFTPERFLENDIDYRGSGRDFRFIPFGAGRRTCPGLPLASRTLTFMLASLLYHFDWKLPDGLKPKDLDMSQNYGITLHKIQPLRAIPLKV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1639 509 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 5 506 - -
Sto1g1639 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Sto1g1639 509 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 506 - -
Sto1g1639 509 Gene3D Cytochrome P450 18 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 SUPERFAMILY Cytochrome P450 34 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 Pfam Cytochrome P450 34 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1639 509 Coils Coil 334 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1639 Sto-Chr1 24485485 24487231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1639 4 508 Cytochrome P450 AT2G45550 48.532 3.37e-173 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1639 - K23810 gmx:100779789 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1639 1 24485485 24487231 Sto1g1639 1 24485485 24487231 ECH