Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1612 atggATAATTACTTCACACTCCTCTCCTTAATCATTTCCTTCCTATTTGCTTCCACTTAtaccctcttcttcttcatctttcaCACCCCAAAAAACCACCAAACCCTACTCCCACCTGGCCCTCCCTCATATCCCATCATAGGAAACATATTCCAACTCAACACTCAAAAGCTTCACCAATCCCTCACTAACCTATCCACAACATATGGTCCCATCATGACCATCAAAATAGGCACCATCACCACTATAGTCATTTCCTCTCCAACCCTAGCCAAGGAAGCCCTTCGGAAGCACGACCACGCCCTCGCGACCCGGTTCGTCCCGCACGCGGTCCAGGCGCTCGGCCATCACGAGTCCTCGGTCATATTCTTGCCGGTGTCCTCCCCGCGTTGGAGGACACTTAGGAAATTTTGTGCCACAAAAATATTCTCCCCCCACAAAATTATTCGGGCCGAAAAGGTCATGGAGAAAATGCTAGGGTTTGTGAGGGAATGTGGCTTCAAGGGTGAGGCTATTGACGTGGGTGAGGCCGCTTTTACGACGGTCCTCAATGCGCTGTCGAACGCGTTCTTCTCGGTGGATTTGGCGGGTTATCGTTCGGATTGCTCGCACGAGTTCAGGGAGGTGATTTCTTGTGTGACTCTTGAGGCTTCTAAGCCTAATGTTGCTGATTATTTGACGTTCTTGCGTTGGTTTGATCCACAAGGGGCAATGAGGAGGATGAGGAAGTATTATGAGaagttgtttagggtttttgaagGTATTGTGGAGGAGAGAATATTGCAGAAGAAGGTGGGATCAGAATTGCTTCACAATCCAGAGAAGATGAATAAAGCCAAAGAGGAAATTCAACAAGTTTTCACCAAACACCAAGAACTCATAAAAGACTCAGACATCTCTAAGCTTCCTTACCTTCAAGCCATTATCAAAGAAACCCTAAGAATGCACCCAGCAGCCCCAATACTAGTCCACAAATCAGAGGCTGAAGTGGAGATTTCTGGCTTCAGAGTGCCCAAAGAGGCCCAAGTTCTGATCAATGTATGGGCCATGGGCCGAGACCCAAGCATTTGGGCTAGCCCAGATGTGTTTTTGCCAGAGAGGTTTATGGAAAGTAGTGATGAGAGGGATTTTAAAGGGAATATTGATTTTGGGTTCATTCCTTTTGGAGCTGGAAGAAGGGTATGCCCAGGAATTCCATTGGCTTTTAGGGTTATACATACTATGGTGGCTTTGCTTCTGCATCACTTTGATTGGAAGCTTGAAGATGGGCAAAAACCAGAAGATATGGACATGAGGGAGGCTTATGGGATTACCTTGTACAAAGTTCAAGGTCTTAGGGCTATGGCTATTCCCATCAAAgagtag 1365 0.4505 MDNYFTLLSLIISFLFASTYTLFFFIFHTPKNHQTLLPPGPPSYPIIGNIFQLNTQKLHQSLTNLSTTYGPIMTIKIGTITTIVISSPTLAKEALRKHDHALATRFVPHAVQALGHHESSVIFLPVSSPRWRTLRKFCATKIFSPHKIIRAEKVMEKMLGFVRECGFKGEAIDVGEAAFTTVLNALSNAFFSVDLAGYRSDCSHEFREVISCVTLEASKPNVADYLTFLRWFDPQGAMRRMRKYYEKLFRVFEGIVEERILQKKVGSELLHNPEKMNKAKEEIQQVFTKHQELIKDSDISKLPYLQAIIKETLRMHPAAPILVHKSEAEVEISGFRVPKEAQVLINVWAMGRDPSIWASPDVFLPERFMESSDERDFKGNIDFGFIPFGAGRRVCPGIPLAFRVIHTMVALLLHHFDWKLEDGQKPEDMDMREAYGITLYKVQGLRAMAIPIKE 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1612 454 Coils Coil 276 296 - -
Sto1g1612 454 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 PRINTS E-class P450 group I signature 306 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 PRINTS E-class P450 group I signature 346 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 SUPERFAMILY Cytochrome P450 32 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 Pfam Cytochrome P450 38 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 Pfam Cytochrome P450 268 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Sto1g1612 454 Gene3D Cytochrome P450 267 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 264 - -
Sto1g1612 454 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 267 451 - -
Sto1g1612 454 Gene3D Cytochrome P450 29 266 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 PRINTS P450 superfamily signature 271 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 PRINTS P450 superfamily signature 307 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sto1g1612 454 PRINTS P450 superfamily signature 386 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1612 Sto-Chr1 23993103 23997170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1612 9 454 Cytochrome P450 AT2G45550 40.705 2.08e-123 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1612 - - lja:Lj0g3v0020129.1 441.425