Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1596 ATGGATAATTATGGATCTTCAGCACCACACCGTTATCCCAATCCCTATGGTTACCCTTCTGCTCCTTATCCACCACCTACAGTTTCAGATCCAATCGCGCATCCTCCTTACCCGCCGCATCAATTCACTCATTCACCTTCCTTCAACTATCCctatcctcctcctcctcataaTTCATCGTCCCCTGACTATAGCCGACCCCCTCCTCCGGTAGACTATGGCCGATTCCCTCCACCATCGGACTATGGCtatcctcctccaccaccagaCTATAAAGTTCCTCCTGGAATTCATGGCCCTTCTCACGCCACCCACCATGGTAGTTTTCAATATGGATCATCTCCTTACCATTCCCAACACATTGAGGCAAACCAGTCTCCTGAAAGACGGCCTTCGGACCATTCACGTGCGAATAGCTTCTCTGGTGGTCTCTACCAGCATGAGGGCCCGAGCGCCCCAGGAGTTGCGTCCTTGCAAAGTAGTAATAGTTTCAGCCCTTCTCGGACTTCTGCATACCCACCTTTGGATGATCTTATGAGCAATGTTCACTTGTCTGATAACCAGCAAACTGCTCCTGCATCGGCCCCTGCTTCTGTTGTAGTGCAGCATTTGGCACATTCTGTTTCGGTTCCGAAAAAAGATAGGAAAGAGGAATTTTATGGTTCTCCTAATAACTCCTTCTCAGGATGGGGTAACTCCTACTCTGGTCGGGTGGATTCATCTAAACTTTCATCTAATTCAGGCTCATTATTGCATAGTCAGAGTTTGCAGATTGTTTCATCTCACAATAAAGGGTCGTTGAAAGTATTGCTCCTACATGGAAATTTAGATATATGGATCCATGAAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACTTTGGGGGATATGTTTGGTAAACTACCTGGGAATATGACCAACAAAATTGAAGGAACTATGAGTAAGAAGATTACAAGTGATCCTTATGTAACAGTTTCAATATCCGGTGCTGTAATTGGAAGGACTTTTGTCATTAGCAACAGTGAAAATCCTGTTTGGAGACAGCATTTCCATGTTCCCGTTGCACATAATGCTGCTGAAGTGCACTTTGTTGTCAAAGACAGTGATGTTGTAGGTTCACAGCTCATTGGCCTTGTATCAATTCCTGTGGAACAATTATACATGGGGGAAAAAGTAGAAGGGACTTATCCTATCCTGAATAATAGTGGGAAGCCTTGTAAGCAAGGGCCTGACTACACTGGGGTTCCTGGCACATATTTTCCTCTGAGGAAAGGTGGAACTGTTACTCTATATCAAGATGCCCACGTTCCTGATGGCTGCCTCCCTAATGTGATACTTGACCGAGGGATGTATGCTCATGGAAAATGCTGGCATGAAATGTTTGATGCTATACGTCAAGCCCGGCGTTTGATTTATATTACAGGGTGGTCAGTGTGGCACAAACTTCAGATGGTAAGGGATGCTGGTAATCCATCTGGTTACACCCTGGGTGATCTTTTGAGGTCCAAGTCACAGGAAGGAGTAAGAGtgcttctccttgtttgggatgACCCTACGTCAAGGAACATTTTGGGTTATAGAACAGATGGTGTCATGGCAACTCATGATGAAGAAACTCGACGATTTTTCAAACACTCTTCTGTGCAAGTACTGCTTTGTCCACGCATTGCAGGAAAACGGCATAGCTGGTACAAGCAAAAGGAAGTTAGTACTATATATACGCATCACCAGAAAACTGTTATTGTGGATGCTGCTGCTGGaaataatagaagaaaaatTGTGGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATACTCCTAACCATCCTATCTTTAGGACACTCCAGACACTGCACAAAGATGACTATCACAACCCTACTTTCACGGGTAACATTGGTGGTTGTCCAAGGGAGCCATGGCATGACTTGCATTCTAAAATTGATGGTCCGGCAGCATATGATGTTCTGACCAACTTTGAGGAGCGCTGGTTAAAAGCTGCAAAACCTCATGGGATAAAAAAGTTGAAAGTTTCGTATGATGATTCTTTACTTAGGCTAGAAAGAATTCCAGATATTATTGGCATGTCTGATGCTCCTAATGTCGGTGAGAATGATCCTGAAGCTTGGCATGTTCAGGTATTTCGATCAATTGATTCAAATTCTGTTAAGGGATTTCCTAAGGATCCAAAAGATGCAACAAGCAAGAATTTAGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTGAAGGCCATTCGTGCTGCACAgcattacatatatatagaaaatcaaTATTTCATTGGATCTTCATACAATTGGAGTCAGCATAAAGACCTTGGTGCTAATAATTTGATTCCTATGGAAATCGCCCTAAAAATTGCTGAAAAGATAAGGGCAAACGAGCGGTTTGCTGTTTATGTTGTTATTCCGATGTGGCCTGAGGGTGTCCCAACAGGGGCTGCCACACAAAGGATTCTATTTTGGCAGCATAAAACTATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTTGAAGAGGCATTCTCGCCAGAAGATTATTTGAACTTTTTCTGTCTTGGCAATCGGGAGGTCAGTGATATGTATAGTAATAATGCAGTGCCTGGAAATCCTCCTCCAGCAAACAGTCCACAGGCACTTAGTAAAAGTAGCCGACGTTTCATGATTTACGTTCATTCAAAAGGAATGATAGTTGATGACGAATATGTTATATTGGGGTCTGCAAACATCAACCAGCGCTCTATGGAAGGAACTAGAGACACTGAGATTGCAATGGGATCCTACCAACCCAATTATACCTGGGCAAGAAGACATTCTTATCCACGGGGAGAGATCCATGGATATAGGATGTCACTTTGGGCAGAACACACAGGAACAATTGAGAACTGCTTCTTGGAACCTGAGAGCCTTGAATGTGTAAGAAGGGTTAGAGCAATGGGTGAAATGAACTGGAAACAATTTGCAGCACCCGAAGTAACAGAAATGAGAGGGCACCTGCTGAAATACCCAGTAGAAGTTGATCGAAAGGGAAAGGTTAGATCCCTTCCTGGTCATGAAGAATTCCCTGATGTGGGAGGCAAAATAATCGGATCATTTCTTGCCATTCAGGAGAATCTTACCATTTGA 3189 0.4227 MDNYGSSAPHRYPNPYGYPSAPYPPPTVSDPIAHPPYPPHQFTHSPSFNYPYPPPPHNSSSPDYSRPPPPVDYGRFPPPSDYGYPPPPPDYKVPPGIHGPSHATHHGSFQYGSSPYHSQHIEANQSPERRPSDHSRANSFSGGLYQHEGPSAPGVASLQSSNSFSPSRTSAYPPLDDLMSNVHLSDNQQTAPASAPASVVVQHLAHSVSVPKKDRKEEFYGSPNNSFSGWGNSYSGRVDSSKLSSNSGSLLHSQSLQIVSSHNKGSLKVLLLHGNLDIWIHEAKNLPNMDMFHKTLGDMFGKLPGNMTNKIEGTMSKKITSDPYVTVSISGAVIGRTFVISNSENPVWRQHFHVPVAHNAAEVHFVVKDSDVVGSQLIGLVSIPVEQLYMGEKVEGTYPILNNSGKPCKQGPDYTGVPGTYFPLRKGGTVTLYQDAHVPDGCLPNVILDRGMYAHGKCWHEMFDAIRQARRLIYITGWSVWHKLQMVRDAGNPSGYTLGDLLRSKSQEGVRVLLLVWDDPTSRNILGYRTDGVMATHDEETRRFFKHSSVQVLLCPRIAGKRHSWYKQKEVSTIYTHHQKTVIVDAAAGNNRRKIVAFVGGLDLCDGRYDTPNHPIFRTLQTLHKDDYHNPTFTGNIGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKAAKPHGIKKLKVSYDDSLLRLERIPDIIGMSDAPNVGENDPEAWHVQVFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYVVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEAGLEEAFSPEDYLNFFCLGNREVSDMYSNNAVPGNPPPANSPQALSKSSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGSYQPNYTWARRHSYPRGEIHGYRMSLWAEHTGTIENCFLEPESLECVRRVRAMGEMNWKQFAAPEVTEMRGHLLKYPVEVDRKGKVRSLPGHEEFPDVGGKIIGSFLAIQENLTI 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1596 1062 Gene3D Endonuclease Chain A 720 961 - -
Sto1g1596 1062 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 573 608 IPR001736 GO:0003824
Sto1g1596 1062 MobiDBLite consensus disorder prediction 1 180 - -
Sto1g1596 1062 CDD C2_plant_PLD 268 412 - -
Sto1g1596 1062 Pfam Phospholipase D C terminal 982 1052 IPR024632 -
Sto1g1596 1062 Gene3D C2 domain 269 408 IPR035892 -
Sto1g1596 1062 SUPERFAMILY Phospholipase D/nuclease 422 672 - -
Sto1g1596 1062 MobiDBLite consensus disorder prediction 153 170 - -
Sto1g1596 1062 SMART C2_3c 275 397 IPR000008 -
Sto1g1596 1062 MobiDBLite consensus disorder prediction 15 95 - -
Sto1g1596 1062 Pfam C2 domain 274 400 IPR000008 -
Sto1g1596 1062 SMART pld_4 573 608 IPR001736 GO:0003824
Sto1g1596 1062 SMART pld_4 908 935 IPR001736 GO:0003824
Sto1g1596 1062 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 908 935 IPR001736 GO:0003824
Sto1g1596 1062 SUPERFAMILY beta-sandwich domain of Sec23/24 10 114 - -
Sto1g1596 1062 Pfam Phospholipase D Active site motif 909 935 IPR001736 GO:0003824
Sto1g1596 1062 Pfam Phospholipase D Active site motif 574 608 IPR001736 GO:0003824
Sto1g1596 1062 PANTHER PHOSPHOLIPASE D ALPHA 1 179 411 - -
Sto1g1596 1062 PANTHER PHOSPHOLIPASE D ALPHA 1 411 1062 - -
Sto1g1596 1062 ProSiteProfiles C2 domain profile. 252 398 IPR000008 -
Sto1g1596 1062 MobiDBLite consensus disorder prediction 106 122 - -
Sto1g1596 1062 Gene3D Endonuclease Chain A 450 688 - -
Sto1g1596 1062 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 272 405 IPR035892 -
Sto1g1596 1062 PANTHER PHOSPHOLIPASE D 411 1062 IPR015679 -
Sto1g1596 1062 PANTHER PHOSPHOLIPASE D 179 411 IPR015679 -
Sto1g1596 1062 SUPERFAMILY Phospholipase D/nuclease 739 994 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1596 Sto-Chr1 23776979 23788056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1596 70 1062 Phospholipase D Gene Family (Wang group) AT2G42010 68.744 0.0 1427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1596 K01115 - gmx:100791059 1620.14