Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1565 ATGTCTCAATCCTTCAGAATCACCACCCTCTTACCAACAACACTCACGGTGCTGCTTCTCTTGGCATCCGAATCCTCCAATGTCGTCGTTCATGCCAAAACGCACGTGAGAGTGTACAACGGGCTAGATCACGGCAATATCCTGACCGTTCATTGCAAATCCTCCGACGACGACATCGGAACGCTCGTCGTTCGTCCCGGTGGATTCTTCGAGTTCAGTTTCAAAGTGGATTTCTTCTTCACGACACTATTCCATTGTACGTTTCAGTGGCCAGGGGTGACTCACAGGTTTGATATATACGACGCTGTGAGAGAGGATTGCCTTGAGTGCTATTGGCGTATTACGGAAAGTCAACCATTGGATGGCCGAACATCATTCACATGGGCCATTGAAAATTCTGTGATACCAAGCCAAAGCTCTATAAGCCTTGCAATGACATTATCAAGAGTGTTTGAGAGAATAACGTCTTGGCAACTAGCATGTGGATTTCAACCTGAAGCTAGAGTTTTATGTTAA 516 0.4612 MSQSFRITTLLPTTLTVLLLLASESSNVVVHAKTHVRVYNGLDHGNILTVHCKSSDDDIGTLVVRPGGFFEFSFKVDFFFTTLFHCTFQWPGVTHRFDIYDAVREDCLECYWRITESQPLDGRTSFTWAIENSVIPSQSSISLAMTLSRVFERITSWQLACGFQPEARVLC 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1565 171 PANTHER S-PROTEIN HOMOLOG 2 13 124 - -
Sto1g1565 171 SUPERFAMILY Cupredoxins 31 87 IPR008972 -
Sto1g1565 171 Pfam Plant self-incompatibility protein S1 35 118 IPR010264 -
Sto1g1565 171 PANTHER - 13 124 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1565 Sto-Chr1 23273621 23276303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1565 31 119 Carbohydrate Esterase AT3G16970 35.789 4.25e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1565 - - cic:CICLE_v10006523mg 86.6557