Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1535 atggatatagGTTGTAGCTTACCGCATTCAAGAATATTATTACATAGAGATGGGAGGATGAGTTGCAAACAAAGATTAATGCATCATTTTGATTCTTCCTCTACGTTCAGAAGGAGAGGCTTTGGGTGTGCCTTTCTTGGCAACTCGAGTACTATTTTGAAAGGTATTACAGCTTGTCAGAAGGCAAGAATGATTTCTGTTGGGGAGTTCAAAGTTTCAAATATGAAGAGAACTTGGTCCAGTAAGAATAATACTATTTTAGTGGGATCCAGAGCAATTTGGTTAAAGTGCCAGGGTAATGATTCTTTAGCATATGTTAATGGAAATAGTCGTAACATAGATTATGTGGAAGGTTCAGGTGAGGAATTGGGATTAGGACATGCTTCTAGTGCTGAACTAACTGCGTCATtggaagaagcagaagaagggGGACATGGGGAAGTAGAGGTGCAAAGTGTGGATGAACTGAAAGAAATATTGCAAAAAGCATTGAAGGACTTGGAAGTTGCTAGAGTAAATAGTACCATGTTTGAGGAAaaggttaaaaaaatttcagagACTGCAATATCTTTGCAGGATGAAGCAGCAAATGCTATGAATGATGTTAATTCCACTCTTGATGCCATCCAAGAAATTGTGAATGAAGAAAGTTTTGCTAAAGAAGCTGTTCAAAAAGCAACAATGGCCCTTTCATTAGCTGAGGCAAGGCTTCAAGTGGCTATAGAATCTGTAGAGGTTGCTAAAGAAGAGCACGATACACCACAAGGTTCTAACGAGAGTGATGGGGACAGCGACATAATGGAAGAGGAGAAAGCACTTTTTGATGCTCAGGAAGATGTCAAGGAATGCCAGACAAATTTAGTGAATTGTGAAGAAGCACTGAAATGCTTGCAGAATAGAAAGGAAGAGTTGCAGAAGGAAGTGGAAAAGTTGAATGAACATGCAGAAAAGGCACAGATGAAGGCATTGAAAGCAGAGGAGGATGTTACAAACATAATGCTTTTAGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACACAGCGTGTGAATGATGCAGAGATTGCCTTACAGAAGGCAGATAAATCTGCCTCCAGTCCTAATGTTGACATTATAGAAACTACACAAGTAAAAGATGCTGAGGCTGTCTCTGAGGAGGAGCAAAAGGTTCAAGACTTTTCTGGTGATTTCACTGCTGAAGGGGATGGAGATTCTCCAGTTGATGATGAAACCTTGTTTCTGAAGCGATCGCCAGAAACACTCTCTGATAAAACTCAGTCTGATTACTTGAGTGATCATGAGAATGGACAGTTAAGCTCAGACTCTTCGAATGCAGTTCAAACAAAAAAGCAGGAGACACAGAAAGATTTGACTAGAGATAGTTCACCCTCTGCTCCCAAGGCATTATTGAAGAAGTCTTCCCGTTTCTTTCCTGCatcattcttttcttttgcaGTAGATGGAACTGAATTCACCCCGGCATCAGTTTTCCAGGGTCTCATGGAGTCTGCACAGAAGCAGTTGCCTAAGGTGGTTCTTGCGTTATTGTTAATGGGAGCAGGGGTTGCCTTTTATGCCAATCGAGCAGAGAGGAATTCTCTGCTCCTTCAACAGCCAGAAGTTATTACAAGCAGTGTTGAAGAAGTTTCCTCAAGTGCAAAGCCTCTAGTTAAACAATTGCAGAGGCTCCCTAAGagaattaagaaaattattgcgTCATTACCACAACAAGAGgTGAATGAGGAGGAAGCCTCCCTCTTGGACATGCTTTGGTTATTGCTCGCAAGTGTTGTATTCGTGCCTCTATTTCAAAAAATTCCTGGAGGTAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATCGGGCCGTATGGTCTCTCCATAATTCGTCATGTTCATGGGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTATTATTCAATATTGGCTTGGAGCTCTCTGTTGAAAGgcttagttcaatgaagaaatACGTCTTTGGATTAGGCTCTGCTCAGGTCTTGGTGACTGCTGTAGTAGTTGGCTTGGTGGCTCATTATGTTTGTGGTCTACCTGGCCCTGCTGCAATTGTCATTGGGAATGGCCTGGCGTTATCATCCACTGCTGTTGTTCTGCAGGTCTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGTCGAGCTACTTTTTCTGTTTTACTTTTTCAGGATTTGGCCGTTGTGGTCCTGCTTATACTCATACCTCTTATTTCGCCAAATTCGTCCAAAGGAGGGGTTGGTTTCCAAGCTATTGCTGAAGCTCTTGGACTGGCTGCTGTCAAGGCAGCAGTTGCAATCACTGCCATAATCGCAGGTGGACGATTGCTCCTTCGACCAATATATAAGCAGATTGCTGAAAATCAGAATGCAGAGATATTTTCCGCCAATACACTCCTTGTTATTCTTGGGACTAGTCTCCTCACAGCTAGGGCAGGACTTTCCATGGCATTAGGGGCTTTTTTGGCAGGTTTACTACTAGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGTCTTCTACTGGGGCTCTTCTTTATGACTGTTGGAATGTCAATTGATCCAAAACTACTTGTGTCTAACTTTCCGGTCATCTCAAGCACATTGGGACTCTTAATATGTGGCAAGACTATGTTGGTTTCTTTTATTGGTAGAAGTTTTGGGGTTTCACTCATTTCTGCCATTAGGGTTGGCCTTCTTCTTGCTCCTGGAGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGCTTTCTTCTCTGTTGTTTCTTGTTGTGGGAATTTCTATGGCCCTCACGCCATGGCTAGCTGCTGGTGGCCAGTTTCTCGCTTCCCGTTTTGAGCAGCATGATGTTCGAAGCCTATTACCAGTAGAAAGTgagACGGATGATCTGCAAGATCATATCATTATCTGTGGATTTGGACGAGTTGGCCAGATCATTGCTCAACTACTTTCTGAGCGACTGATCCCTTTTGTTGCACTAGATGTGAGAAGTGATAGAGTGGCAGTTGGTCGAGCTTTGGATCTCCCTGTATACTTTGGAGATGCTGGTAGTCGTGAGGTCTTACATAAGATAGGGGCTGAAAGAGCATGCGCTGCAGCAGTAACTCTAGATTCCCCCGGTGCAAATTATAGAACAGTTTGGGCTCTGAGCAAGTACTTCCCCAACGTGAAGACTTTTGTTCGTGCTCATGATGTTGATCATGGCTTGAATTTAGAAAAGGCTGGAGCTACTGCAGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTTCTTGCACAGGCAAAACTTCCCACATCAGAGATCGCATCAACTATAAATGAATTCAGATCCCGCCATCTTGCTGAGCTCGCAGAGTTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATTTAACAGGATGAGCAAACCCAAATCTCAATCCTCAGATTCATTGGATGATAACCAAATCTCTGAAGGGACACTGGCAATATGA 3570 0.4204 MDIGCSLPHSRILLHRDGRMSCKQRLMHHFDSSSTFRRRGFGCAFLGNSSTILKGITACQKARMISVGEFKVSNMKRTWSSKNNTILVGSRAIWLKCQGNDSLAYVNGNSRNIDYVEGSGEELGLGHASSAELTASLEEAEEGGHGEVEVQSVDELKEILQKALKDLEVARVNSTMFEEKVKKISETAISLQDEAANAMNDVNSTLDAIQEIVNEESFAKEAVQKATMALSLAEARLQVAIESVEVAKEEHDTPQGSNESDGDSDIMEEEKALFDAQEDVKECQTNLVNCEEALKCLQNRKEELQKEVEKLNEHAEKAQMKALKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALQKADKSASSPNVDIIETTQVKDAEAVSEEEQKVQDFSGDFTAEGDGDSPVDDETLFLKRSPETLSDKTQSDYLSDHENGQLSSDSSNAVQTKKQETQKDLTRDSSPSAPKALLKKSSRFFPASFFSFAVDGTEFTPASVFQGLMESAQKQLPKVVLALLLMGAGVAFYANRAERNSLLLQQPEVITSSVEEVSSSAKPLVKQLQRLPKRIKKIIASLPQQEVNEEEASLLDMLWLLLASVVFVPLFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYVCGLPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVISSTLGLLICGKTMLVSFIGRSFGVSLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQFLASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAVTLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIASTINEFRSRHLAELAELCEASGSSLGYGFNRMSKPKSQSSDSLDDNQISEGTLAI 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1535 1189 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 991 1133 IPR036291 -
Sto1g1535 1189 Coils Coil 266 328 - -
Sto1g1535 1189 Coils Coil 230 250 - -
Sto1g1535 1189 MobiDBLite consensus disorder prediction 418 451 - -
Sto1g1535 1189 MobiDBLite consensus disorder prediction 379 393 - -
Sto1g1535 1189 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 593 873 IPR004771 GO:0006812|GO:0008324|GO:0016021
Sto1g1535 1189 MobiDBLite consensus disorder prediction 378 466 - -
Sto1g1535 1189 Gene3D - 582 967 IPR038770 -
Sto1g1535 1189 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 23 1189 - -
Sto1g1535 1189 Gene3D - 990 1154 - -
Sto1g1535 1189 MobiDBLite consensus disorder prediction 1165 1189 - -
Sto1g1535 1189 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 23 1189 - -
Sto1g1535 1189 Pfam TrkA-N domain 995 1108 IPR003148 GO:0006813
Sto1g1535 1189 ProSiteProfiles RCK N-terminal domain profile. 994 1116 IPR003148 GO:0006813
Sto1g1535 1189 Coils Coil 181 201 - -
Sto1g1535 1189 Coils Coil 150 173 - -
Sto1g1535 1189 Pfam Sodium/hydrogen exchanger family 591 962 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1535 Sto-Chr1 22895015 22915294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1535 81 1189 Inorganic Solute Cotransporters AT4G00630 71.919 0.0 1452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1535 - - gmx:100798822 1683.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1535 1 22895015 22915294 Sto1g1535 1 22895015 22915294 ECH