Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1510 ATGGCAGAACGAGTGGTTGGTACTGGTTCCTTTGGTGTTGTTTTTCAgGCTAAGTGTGTTGAAACTGGTGAAGCAGTTGCCATAAAGAAGGTGTTGCAGGATAAGAGATATAAGAATAGGGAACTTCAGATTATTCGAATGCTTGACCACATTAACGTCTGTCAGTTAAAGCAATGTTTCTTTTCAACTACTGATAAAGATGAGTTGTACCTGAACCTAGTTTTGGAGTATGTACCAGAAACTGTCTACAGAGTTTCAAAGCACTATGTTAGAATGCACCAACACATGCCTATAATTTATGTGCAACTGTATACTTACCAGATATGTCGTGCATTAAATTATCTACATAATGTGGTCGGTGTCTGTCATCGTGATATCAAACCTCAGAATTTACTGGTTAATTCTCAGACTCATCAACTAAAGATATGTGATTTTGGAAGTGCAAAGATGTTGGTTCCTGGTGAACCCAACATATCATACATATGCTCGAGGTATTATAGAGCTCCAGAACTTATATTTGGGGCGACAGAATACACAACTGCTATTGATATATGGTCTGTTGGTTGTGTTTTGGCTGAGCTGCTTCTAGGACAGCCATTGTTTCCTGGAGAAAGTGGAGTTGATCAATTGGTTGAAATCATTAAGatcTTGGGAACACCAACAAGAGAAGAAATAAAATGCATGAATCCAAATTACACAGAATTTAAGTTTCCCCAAATCAAAGCACACCCGTGGCATAAGGTTTTTCACAAGAGATTGCCTCAAGAAGCAGTGGATCTCGTGTCAAGGCTACTTCAGTATTCACCAAATCTACGTTGCACCGCTTTGGAAGCATGCGCACACTCCTTCTTTGATGATCTTAGAGATCCAAATACACGCTTACCAAATGGGAGACCACTACCTCCTTTGTTCGATTTCTCTGATAAAGAACTGGCTAGTGCACCCGCTGAGTTGTGTCGTCGTCTCATTCCCGAGCATGCGAGGAACTGA 990 0.404 MAERVVGTGSFGVVFQAKCVETGEAVAIKKVLQDKRYKNRELQIIRMLDHINVCQLKQCFFSTTDKDELYLNLVLEYVPETVYRVSKHYVRMHQHMPIIYVQLYTYQICRALNYLHNVVGVCHRDIKPQNLLVNSQTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKRLPQEAVDLVSRLLQYSPNLRCTALEACAHSFFDDLRDPNTRLPNGRPLPPLFDFSDKELASAPAELCRRLIPEHARN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1510 329 Gene3D Transferase(Phosphotransferase) domain 1 80 328 - -
Sto1g1510 329 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1510 329 SUPERFAMILY Protein kinase-like (PK-like) 3 312 IPR011009 -
Sto1g1510 329 Pfam Protein kinase domain 3 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1510 329 PANTHER SHAGGY-LIKE KINASE 1 328 - -
Sto1g1510 329 ProSitePatterns Protein kinases ATP-binding region signature. 6 30 IPR017441 GO:0005524
Sto1g1510 329 CDD STKc_GSK3 3 287 IPR039192 -
Sto1g1510 329 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Sto1g1510 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Sto1g1510 329 SMART serkin_6 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1510 329 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1510 Sto-Chr1 22650582 22654960 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1510 6 292 Core Cell Cycle Gene Families AT1G76540 34.899 2.10e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Sto1g1510 Pkinase 5.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1510 K00924 - gmx:100784150 614.764