Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1491 ATGGCTAATCCTTCGCTTCTTCAGTCCTCTACGTCGTCGTTTCTAGGGCAATTCCGGGTCTTTCCATCTCCATTGTCCTCCAGATTCCTTTACAGAAACGGGAATGGATGCTCGGCGGCGCCGGTGAAGGCTACGGCCGCCGGTATTGTGCTGGTGGAGAAGTCCGAAGCTGAGAAGCCCTACCGGCTCAAAACAACTTACAATGAGAAAATAGTTCCCTTGCTTATGGAAGAATTTTCCTACAAGAATATACACGAGGTCcctaaaattgagaaaattgtGGTTAACTGCGGTATTGGAGATGCTGCACAAAATGCAAAGGGTTTGGAAGCGGCAATGAATGATCTAGCGGTCATAACAGGACAGAGGCCTGTTAAGACACGAGCGAGGGCTTCCATTGCCACCTTCAAGATCAGGGAAGGTCAACCCCTTGGGATTGCTGTGACACTCAGAGGAAAAATGATGTATTCATTCCTAGACCGAGTTATCAACTTAGGGCTTCCTAGGACAAGGGATTTCCAAGGTGTTAACCCCAACAGCTTCGATGGGCACGGAAATTACAGTATCGGCATTAAGGACCAGAGCGTGTTTCCGGAAATCAGGTTCGATGCCATCGGTACGCCTAAAGGAATGGATGTCTGTATAACAACTACCGCTAAATCCGATCAAGAAGCACAGAAATTGCTGGCTCTTATGGGCATGCCATTCAGAGAgggaggtggtggtggtggtgctcCTGCAggatcaaagtccatGTGGGCGatccactcGGGATCTCCGGGGCGGAGATATGCCGGTTGA 801 0.4557 MANPSLLQSSTSSFLGQFRVFPSPLSSRFLYRNGNGCSAAPVKATAAGIVLVEKSEAEKPYRLKTTYNEKIVPLLMEEFSYKNIHEVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLAVITGQRPVKTRARASIATFKIREGQPLGIAVTLRGKMMYSFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQSVFPEIRFDAIGTPKGMDVCITTTAKSDQEAQKLLALMGMPFREGGGGGGAPAGSKSMWAIHSGSPGRRYAG 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1491 266 ProSitePatterns Ribosomal protein L5 signature. 116 132 IPR020929 GO:0003735|GO:0005840|GO:0006412
Sto1g1491 266 Gene3D - 54 238 IPR022803 -
Sto1g1491 266 SUPERFAMILY RL5-like 62 237 IPR022803 -
Sto1g1491 266 Pfam Ribosomal protein L5 83 139 IPR031310 -
Sto1g1491 266 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 59 238 IPR002132 GO:0003735|GO:0005840|GO:0006412
Sto1g1491 266 Pfam ribosomal L5P family C-terminus 143 236 IPR031309 -
Sto1g1491 266 Hamap 50S ribosomal protein L5 [rplE]. 60 238 IPR020930 GO:0003735|GO:0005840|GO:0006412
Sto1g1491 266 MobiDBLite consensus disorder prediction 240 266 - -
Sto1g1491 266 PANTHER 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL 59 238 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1491 89 216 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 26.562 7.95e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1491 K02931 - pvy:116112842 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1491 1 22463507 22468121 Sto1g1491 1 22463507 22468121 ECH