Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1473 ATGTCTGTGGAGTCCGCCTCTGCTTCGGCTGACCATAATATCAGAGGCGTGCCCACCCATGGTGGACGCTACGTTCAGTACAATGTGTTCGGCAATCTCTTCGAGGTTTCGAGGAAGTATATCCCTCCGATTCGGCCCGTGGGTAGAGGCGCTTACGGGTTTTTTTTATGCAATTTGTTCCGAAATGTTGAGGATACAAGCAAGAAGATGTTTTCTGTTTCTAGTCAAACCGTTTGTGTTTTGGTTCTATATGTTACTGGAGTTCTGAAATATGGAGAAATTGTAAGACTAGAATTTACATTAGTTTCTTCATCTGGTGGTTGGTTCTTTGTGATTCCTGATCTGTGTAATGAAGTTGTTGCTGCTGTGAATGCGGAGACACGAGAAGAAGTTGCCATTAAGAAGGTTGGTAATGCATTTGACAACAGAATAGATGCCAAAAGAACCTTACGAGAAATTAAACTTCTTCGACACATGGACCATGAAAATGTGATGGCCCTCAAAGACATTATACGACCTCCACAGAAGGAGAACTTCAATGATGTGTACATGGTTTATGAGTTAATGGACACCGATCTGCATCAAATAATACGTTCCAATCAACCATTGACCGATGATCATTGTCGGATTCCAGATTCTAGTGTCTATAAGAATGCTGGTTCGGTATTGTCAAAGCCTATTACTAAGTTGTTCTTGCTGTTACGGGGTCTCAAATATGTACATTCAGCAAATGTTTTGCACCGTGATCTAAAGCCTAGCAATTTGCTCCTGAATGCCAATTGCGATCTTAAGATTGGAGACTTTGGTCTTGCTAGAACTACATCTGAAACTGATTTTATGACTGAGTATGTGGTTACTCGATGGTACCGAGCTCCAGAATTGCTTCTTAATTGTTCAGAATACACTGCAGCCATTGATATATGGTCTGTGGGTTGTATCCTTGGTGAAATTATGACAAGACAGCCTCTCTTCCCAGGCAAAGATTACGTTCATCAGCTGAGACTGATCACTGAGATCCTGATTTTGGATATCCCACTTGTTCATTACAATATTCTCATAGGTTCACCTGATGATACCAGCCTTGGATTTCTTCGAAGTGATAATGCCCGTCGATATGTAAGACAGCTTCCACAATATCCAAGACAACAATTTTCTGCAAGATTTCCCAACATGTCTCCTGGTGCTGTTGATTTGTTGGAGAAGATGCTCGTCTTTGATCCGGACAGGCGCATTACAGTTGATGAGGCTTTATGTCACCCATACTTGGCGCCTCTCCATGATATTAATGAGGAGCCAGTTTGCCCCAGACCTTTCAGTTTCGATTTTGAGCAACCGACATTCACTGAAGAAGATATCAAGGAACTAATCTGGAGAGAATCTGTGAAGTTCAATCCTGATCCACCAATTCACTGA 1413 0.4197 MSVESASASADHNIRGVPTHGGRYVQYNVFGNLFEVSRKYIPPIRPVGRGAYGFFLCNLFRNVEDTSKKMFSVSSQTVCVLVLYVTGVLKYGEIVRLEFTLVSSSGGWFFVIPDLCNEVVAAVNAETREEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENVMALKDIIRPPQKENFNDVYMVYELMDTDLHQIIRSNQPLTDDHCRIPDSSVYKNAGSVLSKPITKLFLLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITEILILDIPLVHYNILIGSPDDTSLGFLRSDNARRYVRQLPQYPRQQFSARFPNMSPGAVDLLEKMLVFDPDRRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFEQPTFTEEDIKELIWRESVKFNPDPPIH 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1473 470 Gene3D Transferase(Phosphotransferase) domain 1 189 449 - -
Sto1g1473 470 SMART serkin_6 110 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1473 470 Pfam Protein kinase domain 118 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1473 470 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 17 57 - -
Sto1g1473 470 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 119 469 - -
Sto1g1473 470 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 17 57 - -
Sto1g1473 470 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 119 469 - -
Sto1g1473 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Sto1g1473 470 Gene3D Phosphorylase Kinase; domain 1 118 459 - -
Sto1g1473 470 Gene3D Phosphorylase Kinase; domain 1 18 73 - -
Sto1g1473 470 ProSiteProfiles Protein kinase domain profile. 41 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1473 470 SUPERFAMILY Protein kinase-like (PK-like) 118 429 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1473 Sto-Chr1 22294122 22300708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1473 1 53 MAP Kinase Gene Family AT4G01370 67.273 8.40e-18 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sto1g1473 Pkinase 9.6e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1473 K20600 - cpap:110807105 618.616