Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1436 ATGGGAGAAGTTGTAGGGGAGCCTAATCCAGGTGTGGTTGAAGAGAAAATCTACGTTGCTGTTTCCAATGATGTGAAACATAGCAAATTAAATCTGATATGGGCCATTCAAAATTCTGGAGGAAAGAAGATTTGCATCCTTCACATTCATGTTCCTGCAACTATGATCCCCTTGATGGGTACTAAGTTTCCCGCAAGTTCACTGGAAGAACAGGAAGTTGAAGCATACAGGGAAATAGAAAGACAAAACATGCATAAAATTCTGAATGAGTATCTTTTAATTTGTCAACGGATGGGGGTACGAGCAGAGAAAGTGCATGATGAAATGGAATGCATTGAGAAAGGAATTGTAGAGCTCGTGTCAAAGTATGGAATCTATAAGCTTGTTATGGGAGCAGCATCTGATAAGTACTATTCTAGGAGAATGATGGAACTCAAATCGAAGAAAGCCATCTATGTACGTGATCATGCTTCTGAGTCTTGTCATATACAATTTATCTGCAGAGGGCATCTTATACACACAAGGGACTGTAGTTTGAATAGAGGTGATGTAGATATTACATCTCCATTGTGGCAGCAAACGCCTAACCCAGAAGTTGGAAGTTCACTCCACTCGAGATCTCAGTCTGTTACACCTGAGCAGAACCATCGGGTAAAACCCACAAATCCAGCTCAAGAGCTATTTCGCAGAGTAAAGTCTGTTAATTTTGGACATAGAAGGAGTGTAGCAACTGTTTCCTCTCCAGACGGCACTGAAGGATTTTCAACTCCACAGAACAGGATGGGTACAGAAGGTAGTTCTGACGAGTCAGAAGGGCTATCAAGAAGGAGCCCGTCAGTTTTCTCAACATTCTCTGATAGTGGTGCAGTTGAAGCAGCTTTGACCCCAGATTTAAATAATGATAAGAGTGGCAATGTGTTACACTTGGATCAAATTTCTCTAGTTAAAGCAGATCTTTGTCATTCATCTCCTCCCAGTGTACTgGATGGAGGAATGGACTATACTCTCTATGATCAACTTGAACAGGCCATGAGCGAGGCTGAGAATGCTAGGCAGGAAGCTTACCAAGAAACTGTTAGGCGTGGGAAAGCTGAAAAAAATGCCATTGCTGCTATACATAGGGCTAAATCCTCCCAAAGCTTATACACAGAGGAGTTGAATTTGAGGAAGGAGGTAGAGGAAGCACTGGAACAAGCAAAAGAAGAACTTGGAAAGATGaagagccaaaatgataaagtaTATCAAGAACTCCAACTTGCCTTAGATCAGAAGTCATCACTAGAGAGTCAAATTGCATCATCAGAACATATGGTAAAGGAGTTGGAGAAGAAGATTATATCTGCCGTGGAATTGCTACAAAGttacaagaaagaaagagatgagCTGCAGGTGTTGCGTGATAATGCATTGATAGAGGCTGAGGAATTGAGGAAAAAACCAGCAGAAGCCTCAAGCACACGCATGCCTCaatttttcttagaattttCTTTTCCAGAGATCGAAGAAGCAACAAATAACTTCAATCTATCCCTAAAGATTGGAGAAGGTGGATATGGAAGTATATATAAGGGTATACTACGTCACACTGAGGTGGCTATCAAAATGTTGCACCCTAACAGCTTGCAAGGACCTTCAGAGTTTCAACAGGAGGTTGATGTATTGAGCAAGTTAAGGCATCCCAATCTCATTACATTAATAGGAGCCTGTCCAGAATCCTGGACTCTTGTCTATGAATATTTGCCCAATGGAAGCCTTGAAGATCGGCTCATTTGCAAAGATAACACGCCTCCCTTATCCTGGCAAACCCGAATTCGCATTGCTGCAGAGCTCTGCTCTGCTCTTATCTTTCTTCATTCCAGTAAACCTCACAGCATAGTGCATGGTGACTTAAAACCCTCCAATATTCTCCTTGATGCAAACCTTGTTAGCAAGCTCAGCGACTTTGGAATCTGTCGTATATTATCTTGTCGTGAGAGTTTAAGTAACAATACTACAGAATGTTGGAGAACTGACCCGAAAGGCACTTTTGTCTACATGGATCCCGAATTTCTTTCTTCAGGGGAACTTACTCCAAAGTCAGATATCTATTCATTTGGAATCATATTATTAAGATTATTAACTGGGAGACCAGCCTTGGGAATAAGGCAGGAAGTGCAATATGCATTGGACGCTGGAAAGTTGAAATCCCTCTTAGATCCTTTGGCTGGAGACTGGCCATTTGTGCAGGCTGAACAGTTGTGTCGCTTGGCATTGAGGTGCTGTGAGATGGACCGAAAGAGCAGGCCAGACCTTTATTCAGATGTCTGGAGGATACTGGAACCGATGAGGGCTTCTTCTGGAGGCACAAATGCCTTCAGAATGGGTTCTGAAGGGCTTTACCAACCCCCTACTTATTTCATTTGTCCAATATTCCTGATAATTGAGGAGAGGTTAATGAAAGGAATTAATGGAACTTTTCAGGAGGTCATGCAAGATCCACATGTTGCCGCTGACGGTTTTACTTACGAAGCTGAGGCTATACGAGGATGGCTGGACAGTGGTCATGAGACTTCACCAATGACAAATGATAAGCTTGCACATCGCAATCTTGTCCCCAACCTTGCTCTTCGCTCCGCGATCCAAGACTGGCTTCAAAATCTCTGA 2643 0.4188 MGEVVGEPNPGVVEEKIYVAVSNDVKHSKLNLIWAIQNSGGKKICILHIHVPATMIPLMGTKFPASSLEEQEVEAYREIERQNMHKILNEYLLICQRMGVRAEKVHDEMECIEKGIVELVSKYGIYKLVMGAASDKYYSRRMMELKSKKAIYVRDHASESCHIQFICRGHLIHTRDCSLNRGDVDITSPLWQQTPNPEVGSSLHSRSQSVTPEQNHRVKPTNPAQELFRRVKSVNFGHRRSVATVSSPDGTEGFSTPQNRMGTEGSSDESEGLSRRSPSVFSTFSDSGAVEAALTPDLNNDKSGNVLHLDQISLVKADLCHSSPPSVLDGGMDYTLYDQLEQAMSEAENARQEAYQETVRRGKAEKNAIAAIHRAKSSQSLYTEELNLRKEVEEALEQAKEELGKMKSQNDKVYQELQLALDQKSSLESQIASSEHMVKELEKKIISAVELLQSYKKERDELQVLRDNALIEAEELRKKPAEASSTRMPQFFLEFSFPEIEEATNNFNLSLKIGEGGYGSIYKGILRHTEVAIKMLHPNSLQGPSEFQQEVDVLSKLRHPNLITLIGACPESWTLVYEYLPNGSLEDRLICKDNTPPLSWQTRIRIAAELCSALIFLHSSKPHSIVHGDLKPSNILLDANLVSKLSDFGICRILSCRESLSNNTTECWRTDPKGTFVYMDPEFLSSGELTPKSDIYSFGIILLRLLTGRPALGIRQEVQYALDAGKLKSLLDPLAGDWPFVQAEQLCRLALRCCEMDRKSRPDLYSDVWRILEPMRASSGGTNAFRMGSEGLYQPPTYFICPIFLIIEERLMKGINGTFQEVMQDPHVAADGFTYEAEAIRGWLDSGHETSPMTNDKLAHRNLVPNLALRSAIQDWLQNL 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1436 880 PANTHER OS02G0152300 PROTEIN 11 879 - -
Sto1g1436 880 SUPERFAMILY Protein kinase-like (PK-like) 485 769 IPR011009 -
Sto1g1436 880 SMART serkin_6 507 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1436 880 CDD STK_N 16 169 - -
Sto1g1436 880 MobiDBLite consensus disorder prediction 239 282 - -
Sto1g1436 880 Coils Coil 382 416 - -
Sto1g1436 880 MobiDBLite consensus disorder prediction 188 221 - -
Sto1g1436 880 ProSiteProfiles Protein kinase domain profile. 507 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1436 880 MobiDBLite consensus disorder prediction 188 282 - -
Sto1g1436 880 Gene3D Phosphorylase Kinase; domain 1 485 579 - -
Sto1g1436 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Sto1g1436 880 CDD STKc_IRAK 513 775 - -
Sto1g1436 880 Coils Coil 337 357 - -
Sto1g1436 880 SMART Ubox_2 798 876 IPR003613 GO:0004842|GO:0016567
Sto1g1436 880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 794 880 IPR013083 -
Sto1g1436 880 Pfam Protein kinase domain 510 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto1g1436 880 Coils Coil 424 479 - -
Sto1g1436 880 ProSiteProfiles U-box domain profile. 809 880 IPR003613 GO:0004842|GO:0016567
Sto1g1436 880 Gene3D Transferase(Phosphotransferase) domain 1 580 785 - -
Sto1g1436 880 PANTHER U-BOX KINASE FAMILY PROTEIN 11 879 - -
Sto1g1436 880 Pfam U-box domain 820 878 IPR003613 GO:0004842|GO:0016567
Sto1g1436 880 SUPERFAMILY RING/U-box 789 878 - -
Sto1g1436 880 CDD RING-Ubox_WDSUB1_like 799 855 - -
Sto1g1436 880 ProSitePatterns Protein kinases ATP-binding region signature. 513 534 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1436 Sto-Chr1 21904494 21909836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1436 4 879 U-box Gene Family AT2G45910 54.587 0.0 923
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Sto1g1436 Pkinase 9.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1436 - - gmx:100807515 1261.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1436 1 21904494 21909836 Sto1g1436 1 21904494 21909836 ECH
Sto6g1030 6 10078338 10081668 Sto1g1436 1 21904494 21909836 ECH