Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1380 ATGGAAGGGGTGAGAGGAATAGATAAGAGAGATGATGATCGTTATGTCAATCATCAAGCTGAGACGAGGACGAATTGCGAAGCAAAAATGTCAATTAGAAATACTAATGGGAAGTTCAGAGTGTATAAATTTGTAGAGGAACACAATCATGATCTCCATCTCCTGCATACAACTCACATGTTAGCGTGTCATCGCAAGTTAACCGAAGTTCAAGCACAGGACATTGAGTTGGCACATAATTCTGGGCTTACACAAAGAGCCACTTACGATCCGATGGGCAGTCAAGTAGGGGAAGGGTTAATCTTGGATATACTCAATTGGATCGATGGAGAAGTgcaaataacaaatatattttgggCGGATGCACGTATGGTCCTTGACTATGGATACTTTGGTGAGGTGGTATCATTTGACACAACATTCTGTACCAACAAAGCAAATCGCCCTCTTGCATTGTTTGGGGGATTGAACCATCATAAGCGAATTGTCATCTTCGGGGCTGCATTGTTATATGACGAGACAGTGGCATGCTATGAATATATGATTAATATGGTTGATTAA 561 0.3993 MEGVRGIDKRDDDRYVNHQAETRTNCEAKMSIRNTNGKFRVYKFVEEHNHDLHLLHTTHMLACHRKLTEVQAQDIELAHNSGLTQRATYDPMGSQVGEGLILDILNWIDGEVQITNIFWADARMVLDYGYFGEVVSFDTTFCTNKANRPLALFGGLNHHKRIVIFGAALLYDETVACYEYMINMVD 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1380 186 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 18 182 IPR031052 GO:0006355
Sto1g1380 186 PANTHER OS01G0852650 PROTEIN 18 182 - -
Sto1g1380 186 Pfam MULE transposase domain 134 183 IPR018289 -
Sto1g1380 186 Pfam FAR1 DNA-binding domain 6 52 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1380 Sto-Chr1 20611934 20616466 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto1g1380 MULE 4.9e-09 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1380 - - cam:101505629 187.193