Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1355 ATGGAGATTAGTCTGATTCTGATCAATGAGCTAACCCAAGGGAAGGGGCTCGCAAAGCAGCTCTATTGGAGCCCCAGAAGTGAGGTCATGGACCAAGATTTTAACCACAAAGATTCCTTCAAGAAAAGAAAGACCATGCCCAGATGGACACAGCAAGTGAAGATTTGCCCAGAAACAGGAGTTGATGGGTCTCTGGATGATGGTCATAACTGGAGAAAATATGGGCAGAAGGATATTCTAGGAGCTAAGTTTCCCAGAGGATATTACAGATGCACTCACAGAAATGTACAAGGTTGCCTTGCCACAAAACAAGTTCAAAGGTCCGATGAAGACCCAACAATTCTGGAGGTAACCTACAGAGGAAGACACACGTGCAGGAAAGCATCTCATATGATCAGTAAGGCAGTTTCATCTAAAAGAAAGATGGGATTGGGAGAAAATAAGGTGCAAAAACGTCACAAGATTGAACCAGAAGTGTACATGCCACTAGAAGAGCAAAACCCAGAAGCATTTTTCAATTTTGGGGCAGAGCTTCAAGTCAAAACAGAGGATTTGGACTCCAAGGAGGACATTTTCCCATCCTTTTGCCTAACTTCTCCTTCAATAGGTTCTGAAAATGAGGACAACCTATTGTTCACAGACACCATGATGGAAAACCATTTCATGGAAACCTTTTCTTCTCCTAAGTTTATGTCTCCAACTACCTCGGAATCAAACATTTTCTGTCTGTCACCACCACCATGCCAGTTTGGAAGCTCTGGACTACTGTGCCAAAATGTGCAGACTTCAGAATCTGATGCCACTGACATAGTTTCAGCTCAAACTTCAGTCTGCAATTCCCCAATTGCTGAGTTGGATCTCTTTGATTTTGACTCGGAATTCCAAGAGTTTTTCTCttcgtaa 903 0.4264 MEISLILINELTQGKGLAKQLYWSPRSEVMDQDFNHKDSFKKRKTMPRWTQQVKICPETGVDGSLDDGHNWRKYGQKDILGAKFPRGYYRCTHRNVQGCLATKQVQRSDEDPTILEVTYRGRHTCRKASHMISKAVSSKRKMGLGENKVQKRHKIEPEVYMPLEEQNPEAFFNFGAELQVKTEDLDSKEDIFPSFCLTSPSIGSENEDNLLFTDTMMENHFMETFSSPKFMSPTTSESNIFCLSPPPCQFGSSGLLCQNVQTSESDATDIVSAQTSVCNSPIAELDLFDFDSEFQEFFSS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1355 300 ProSiteProfiles WRKY domain profile. 65 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto1g1355 300 Gene3D WRKY domain 52 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto1g1355 300 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 24 287 IPR044810 GO:0003700
Sto1g1355 300 Pfam WRKY DNA -binding domain 66 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto1g1355 300 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 24 287 - -
Sto1g1355 300 SUPERFAMILY WRKY DNA-binding domain 64 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto1g1355 300 SMART WRKY_cls 65 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1355 Sto-Chr1 19947543 19950270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1355 24 200 WRKY Transcription Factor Family AT4G23810 44.920 2.41e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto1g1355 WRKY 3.5e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1355 - - gmx:100127387 353.599