Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1351 ATGGCAACGATGCAAGCAGGACGCGATGACTTTGAAGAGCCTAGAAGcACTCACAGTATTATAATGGAGAATGATTTGAAGCCTAAAATGGGAATGGAGTTTGGCACTATAGAGGAAGCTTGGAAATTTTGGGGTGAGTATGGTAGAAGTACTGGATTTGGAGTTAGAAAAAAGTTTACGAATAAGAGCAAGAAAGAAGGCTCAATAAATTCTTGTGGATTCGTGTGTTGCAAGGAAGGGATGAGAGTAAAAGATAATAGAGACAATGATCTTTATGTTAATCACCGAGCTGAGACTAGAACAAATTGTGAAGCTAAAATGGCAATTATAAACACTAATGGAAAGTTCAAAGTTTATAAATTTGTAGAGGAACACAACCATGATCGCCATCTCCAGCACACAACTCACATGTTAGCGTGTCATCGCAAGTTAACTGAAGTTCAAGCACAGGAGATTGAGTTGGCAGATAACTCCGGCCTTAGACAAAGAGCCACTTATGATTTGATGAGCAGTCATGTAGGGGGAAGAGTTAATCTTGGATATACTCGCTTAGATCTAAAAAATTACCTCTGTACAAGAAGACAAAGAAGTTTAATTTTTGGGGAAGTTGCTTGTTTAATGCACTATTTCCAAGATCAGGCGCAAAACAATCCATCAATTTTTCATGCCTATTAG 675 0.3822 MATMQAGRDDFEEPRSTHSIIMENDLKPKMGMEFGTIEEAWKFWGEYGRSTGFGVRKKFTNKSKKEGSINSCGFVCCKEGMRVKDNRDNDLYVNHRAETRTNCEAKMAIINTNGKFKVYKFVEEHNHDRHLQHTTHMLACHRKLTEVQAQEIELADNSGLRQRATYDLMSSHVGGRVNLGYTRLDLKNYLCTRRQRSLIFGEVACLMHYFQDQAQNNPSIFHAY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1351 224 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 161 - -
Sto1g1351 224 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 21 161 - -
Sto1g1351 224 Pfam FAR1 DNA-binding domain 42 128 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1351 Sto-Chr1 19909084 19910252 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto1g1351 FAR1 9.9e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1351 - - cam:101507947 245.743